RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SLC5A6Q9Y289 635 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 ZGRF1Q86YA3 2104 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 A0A087WUV0 522 aaPredicted RBP15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 RTCAO00442 366 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 KRT38O76015 456 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 DDAH2O95865 285 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 CRYABP02511 175 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 PPP2R1BP30154 601 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 CD96P40200 585 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 TMEM35AQ53FP2 167 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 ZNF324BQ6AW86 544 aaPredicted RBP15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 ZNF793Q6ZN11 406 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 CHSY3Q70JA7 882 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 UBE3DQ7Z6J8 389 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 PLD6Q8N2A8 252 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 MDS2Q8NDY4 140 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 CMTM7Q96FZ5 175 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 SCYL1Q96KG9 808 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 SIGLEC12Q96PQ1 595 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 TBCDQ9BTW9 1192 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 DEFB126Q9BYW3 111 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 ZNF358Q9NW07 568 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 NFU1Q9UMS0 254 aa15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 TNPO3Q9Y5L0 923 aaKnown RBP15.67■□□□□ 0.1
CACNA1A-259ENST00000638114 TRBV11-1A0A0K0K1C0 115 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 TGFBR3LH3BV60 316 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 SAP18O00422 153 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 CYR61O00622 381 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 KLK8O60259 260 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 SIX3O95343 332 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 CD46P15529 392 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 ATP5A1P25705 553 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 TPP2P29144 1249 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 SSR2P43308 183 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 MAGEA12P43365 314 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 TDGF1P3P51864 188 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 PMP22Q01453 160 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 SRSF11Q05519 484 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 GTF2H2Q13888 395 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 PCBP2Q15366 365 aaKnown RBP eCLIP15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 TERF2Q15554 542 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 AP5B1Q2VPB7 878 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 KHDRBS2Q5VWX1 349 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 LIPJQ5W064 366 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 SPINK14Q6IE38 97 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 GTF2H2CQ6P1K8 395 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 GOLGA7Q7Z5G4 137 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 RNF175Q8N4F7 328 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 HORMAD2Q8N7B1 307 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 ACOT4Q8N9L9 421 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 B3GNT7Q8NFL0 401 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 DNAJB8Q8NHS0 232 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 HUS1BQ8NHY5 278 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 ISL2Q96A47 359 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 HES7Q9BYE0 225 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 OR51B5Q9H339 312 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 LYRM4Q9HD34 91 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 ADGRE2Q9UHX3 823 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 ZNF180Q9UJW8 692 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 SPACA6W5XKT8 324 aa15.66■□□□□ 0.1
CACNA1A-259ENST00000638114 DOPEY1Q5JWR5 2465 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 MYOCOSA0A1B0GUC4 107 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 A1L4Q6 167 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 TRIM49D1C9J1S8 452 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 LDLRP01130 860 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 IFNA16P05015 189 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 RBP1P09455 135 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 HIST1H1TP22492 207 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 CNTFP26441 200 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 EEF1DP29692 281 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 ARL1P40616 181 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 PIK3CGP48736 1102 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 CLCN2P51788 898 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 RAP1GDS1P52306 607 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 KCNK10P57789 538 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 MLF1P58340 268 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 TSNAXIP1Q2TAA8 658 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 IFT20Q8IY31 132 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 PTGR2Q8N8N7 351 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 TMEM178AQ8NBL3 297 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 APCDD1LQ8NCL9 501 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 THAP3Q8WTV1 239 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 DCAKDQ8WVC6 231 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 PHF21BQ96EK2 531 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 MTERF1Q99551 399 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 MAPKAP1Q9BPZ7 522 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 CENPKQ9BS16 269 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 IPPKQ9H8X2 491 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 ADAP2Q9NPF8 381 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 DMRT3Q9NQL9 472 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 KCMF1Q9P0J7 381 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 LRFN1Q9P244 771 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 XPR1Q9UBH6 696 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 PLEKHB1Q9UF11 243 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 FBXW2Q9UKT8 454 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 PCDHGB6Q9Y5F9 930 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 PCDHGA11Q9Y5H2 935 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 CLDN16Q9Y5I7 305 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 MAST4O15021 2626 aa15.65■□□□□ 0.1
CACNA1A-259ENST00000638114 EXOC1LA0A1B0GW35 172 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms