RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 TSC22D3Q99576 134 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 ADAP2Q9NPF8 381 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 IFT52Q9Y366 437 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 GMPPBQ9Y5P6 360 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 TRIM24O15164 1050 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 ENTPD5O75356 428 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 VNN2O95498 520 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 TOP3BO95985 862 aaKnown RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 CLPTM1O96005 669 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 FHP07954 510 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 PRSS56P0CW18 603 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 ANXA8P13928 327 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 ENGP17813 658 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 GCAP28676 217 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 MASP1P48740 699 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 CENPAP49450 140 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 VSX2P58304 361 aaPredicted RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 ERVPABLB-1P60509 514 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 UFM1P61960 85 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 SPANXN4Q5MJ08 99 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 TECPR1Q7Z6L1 1165 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 ANKRD46Q86W74 232 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 FAM20CQ8IXL6 584 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 MINDY1Q8N5J2 469 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 DPP10Q8N608 796 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 Q8N9G6 341 aaPredicted RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 SMRP1Q8NCR6 262 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 CADM4Q8NFZ8 388 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 OR52E1Q8NGJ3 308 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 B4GALNT2Q8NHY0 566 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 BBS10Q8TAM1 723 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 CHAC2Q8WUX2 184 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 MYDGFQ969H8 173 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 TGM7Q96PF1 710 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 GPATCH1Q9BRR8 931 aaKnown RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 G6PC3Q9BUM1 346 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 NT5DC2Q9H857 520 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 TAAR2Q9P1P5 351 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 CLEC4EQ9ULY5 219 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 C15orf41Q9Y2V0 281 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 MTCH2Q9Y6C9 303 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 H0YIV9 168 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 TNFRSF11BO00300 401 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 SAP18O00422 153 aaKnown RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 EMC8O43402 210 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 MAN1A2O60476 641 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 FAM20BO75063 409 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 HOXC4P09017 264 aaPredicted RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 CD72P21854 359 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 FBLP22087 321 aaKnown RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 LHCGRP22888 699 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 S100A5P33763 92 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 PTDSS1P48651 473 aaKnown RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 CDK6Q00534 326 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 BNC1Q01954 994 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 MTAPQ13126 283 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 ABRAXAS2Q15018 415 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 FXNQ16595 210 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 LEXMQ3ZCV2 418 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 TMEM196Q5HYL7 178 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 DEPDC1Q5TB30 811 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 TLDC1Q6P9B6 456 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 RTL4Q6ZR62 310 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 ZSWIM9Q86XI8 627 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 GATAD2AQ86YP4 633 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 SPPL2CQ8IUH8 684 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 LRRC25Q8N386 305 aaPredicted RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 OR2L5Q8NG80 312 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 OR52B6Q8NGF0 335 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 OR5L2Q8NGL0 311 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 SUN3Q8TAQ9 357 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 PIGXQ8TBF5 258 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 ZNF480Q8WV37 535 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 BTBD9Q96Q07 612 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 NR1H4Q96RI1 486 aaPredicted RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 KCNA7Q96RP8 456 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 KIR3DX1Q9H7L2 352 aa5.29□□□□□ -1.56
CHD2-227ENST00000637572 SDR39U1Q9NRG7 319 aaPredicted RBP5.29□□□□□ -1.56
CHD2-227ENST00000637572 DOCK3Q8IZD9 2030 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 ZFYVE26Q68DK2 2539 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 PROM1O43490 865 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 F7P08709 466 aaPredicted RBP5.28□□□□□ -1.56
CHD2-227ENST00000637572 GABRB3P28472 473 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 CLDN2P57739 230 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 RALGDSQ12967 914 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 SLAMF1Q13291 335 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 EIF4EBP2Q13542 120 aaPredicted RBP5.28□□□□□ -1.56
CHD2-227ENST00000637572 GK3PQ14409 553 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 MYBPC3Q14896 1274 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 TCTN1Q2MV58 587 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.28□□□□□ -1.561e-7■■■■□ 20.4
CHD2-227ENST00000637572 ZNF311Q5JNZ3 666 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 FAM182AQ5T1J6 154 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 METRNLQ641Q3 311 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 NAIF1Q69YI7 327 aaPredicted RBP5.28□□□□□ -1.56
CHD2-227ENST00000637572 REEP3Q6NUK4 255 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 ZNF730Q6ZMV8 503 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 ERMP1Q7Z2K6 904 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 KLHDC8AQ8IYD2 350 aa5.28□□□□□ -1.56
CHD2-227ENST00000637572 SFRP1Q8N474 314 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms