RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 TRIM40Q6P9F5 258 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 TMEM154Q6P9G4 183 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 ABHD17CQ6PCB6 329 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 CBLL1Q75N03 491 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 TAF8Q7Z7C8 310 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 SLC30A8Q8IWU4 369 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 AVL9Q8NBF6 648 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 NT5CQ8TCD5 201 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 PNPT1Q8TCS8 783 aaKnown RBP13.54□□□□□ -0.24
LIMS4-204ENST00000632897 VPS50Q96JG6 964 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 SLC6A18Q96N87 628 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 OR2A14Q96R47 310 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 NLNQ9BYT8 704 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 TPSD1Q9BZJ3 242 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 FOXQ1Q9C009 403 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 TCEAL2Q9H3H9 227 aaPredicted RBP13.54□□□□□ -0.24
LIMS4-204ENST00000632897 TMEM38AQ9H6F2 299 aa13.54□□□□□ -0.24
LIMS4-204ENST00000632897 ACSS1Q9NUB1 689 aaPredicted RBP13.54□□□□□ -0.24
LIMS4-204ENST00000632897 FAF1Q9UNN5 650 aaPredicted RBP13.54□□□□□ -0.24
LIMS4-204ENST00000632897 HEATR5BQ9P2D3 2071 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 TRBV23OR9-2A0A075B6M9 112 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 C2orf74A8MZ97 194 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 ERI3O43414 337 aaKnown RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 TNFRSF21O75509 655 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 MT-ND1P03886 318 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 HIST1H1TP22492 207 aaPredicted RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 ATP5A1P25705 553 aaKnown RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 MAGEA2P43356 314 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 ALDH9A1P49189 494 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 MVDP53602 400 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 PCBP4P57723 403 aaKnown RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 TXNL4AP83876 142 aaKnown RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 BIRC2Q13490 618 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 SLC5A12Q1EHB4 618 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 NHSL2Q5HYW2 709 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 MRM1Q6IN84 353 aaKnown RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 UGT2A3Q6UWM9 527 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 ZNF793Q6ZN11 406 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 EIF3MQ7L2H7 374 aaKnown RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 ASPGQ86U10 573 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 IQCHQ86VS3 1027 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 APLFQ8IW19 511 aaPredicted RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 MMP21Q8N119 569 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 SVOPLQ8N434 492 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 SPEM1Q8N4L4 309 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 RLN3Q8WXF3 142 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 GAL3ST3Q96A11 431 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 ZBED6CLQ96FA7 236 aaPredicted RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 DPH2Q9BQC3 489 aaPredicted RBP13.53□□□□□ -0.24
LIMS4-204ENST00000632897 TRIM4Q9C037 500 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 KLHL31Q9H511 634 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 NTN4Q9HB63 628 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 PRDM7Q9NQW5 492 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 PDP2Q9P2J9 529 aa13.53□□□□□ -0.24
LIMS4-204ENST00000632897 FANCMQ8IYD8 2048 aa13.52□□□□□ -0.24
LIMS4-204ENST00000632897 OR6C74A6NCV1 312 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 UPK1AO00322 258 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 HPRP00739 348 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 C1QCP02747 245 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 NTRK1P04629 796 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
LIMS4-204ENST00000632897 ZNF23P17027 643 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 SOAT1P35610 550 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 CRATP43155 626 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 MANFP55145 182 aaKnown RBP13.52□□□□□ -0.25
LIMS4-204ENST00000632897 MYBPC3Q14896 1274 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
LIMS4-204ENST00000632897 LRRC23Q53EV4 343 aaPredicted RBP13.52□□□□□ -0.25
LIMS4-204ENST00000632897 CHERPQ8IWX8 916 aaKnown RBP13.52□□□□□ -0.25
LIMS4-204ENST00000632897 NAGSQ8N159 534 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 CAMKK1Q8N5S9 505 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 FAM160A2Q8N612 972 aaPredicted RBP13.52□□□□□ -0.25
LIMS4-204ENST00000632897 PJA1Q8NG27 643 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 PSMA8Q8TAA3 256 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 SLC37A2Q8TED4 501 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 TBC1D20Q96BZ9 403 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 SDCCAG3Q96C92 435 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 ANKRD60Q9BZ19 345 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 ASPSCR1Q9BZE9 553 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 ROGDIQ9GZN7 287 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 EPS8L2Q9H6S3 715 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 GPATCH2Q9NW75 528 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 LYARQ9NX58 379 aaKnown RBP13.52□□□□□ -0.25
LIMS4-204ENST00000632897 ZSCAN32Q9NX65 697 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 TEX10Q9NXF1 929 aaPredicted RBP13.52□□□□□ -0.25
LIMS4-204ENST00000632897 APOBEC3BQ9UH17 382 aaKnown RBP13.52□□□□□ -0.25
LIMS4-204ENST00000632897 AK5Q9Y6K8 562 aa13.52□□□□□ -0.25
LIMS4-204ENST00000632897 A0A1W2PR77 199 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 GSAPA4D1B5 854 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 PDLIM1O00151 329 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 EI24O14681 340 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 ZNF682O95780 498 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 CST1P01037 141 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 SEMG1P04279 462 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 SLC35G6P0C7Q6 338 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 JUNDP17535 347 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 POLR2CP19387 275 aaPredicted RBP13.51□□□□□ -0.25
LIMS4-204ENST00000632897 CD38P28907 300 aa13.51□□□□□ -0.25
LIMS4-204ENST00000632897 MAGEA8P43361 318 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms