RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 SKILP12757 684 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 ATP6V1B1P15313 513 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 SELEP16581 610 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 NPY4RP50391 375 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 GSTO1P78417 241 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 NAAAQ02083 359 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 SCN1BQ07699 218 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 CEACAM7Q14002 265 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 KRTAP13-3Q3SY46 172 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 TTC31Q49AM3 519 aaPredicted RBP2.49□□□□□ -2.01
SRP54-214ENST00000630962 IQCCQ4KMZ1 466 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 TEX35Q5T0J7 233 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 MARC1Q5VT66 337 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 ZNF776Q68DI1 518 aaPredicted RBP2.49□□□□□ -2.01
SRP54-214ENST00000630962 LEMD1Q68G75 181 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 CLEC4GQ6UXB4 293 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 SPATA19Q7Z5L4 167 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 METTL23Q86XA0 190 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 Q8N7P7 452 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 OR4Q3Q8NH05 313 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 GANCQ8TET4 914 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 UBLCP1Q8WVY7 318 aaPredicted RBP2.49□□□□□ -2.01
SRP54-214ENST00000630962 ITLN1Q8WWA0 313 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 LIPHQ8WWY8 451 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 DNASE1L2Q92874 299 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 PRMT1Q99873 361 aaKnown RBP2.49□□□□□ -2.01
SRP54-214ENST00000630962 ATG101Q9BSB4 218 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 AP1M1Q9BXS5 423 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 ANKRD2Q9GZV1 360 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 MTIF3Q9H2K0 278 aaKnown RBP2.49□□□□□ -2.01
SRP54-214ENST00000630962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.49□□□□□ -2.01
SRP54-214ENST00000630962 GPR173Q9NS66 373 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 VPS18Q9P253 973 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 NFKBIL1Q9UBC1 381 aaPredicted RBP2.49□□□□□ -2.01
SRP54-214ENST00000630962 GMEB2Q9UKD1 530 aa2.49□□□□□ -2.01
SRP54-214ENST00000630962 NIP7Q9Y221 180 aaKnown RBP eCLIP2.49□□□□□ -2.01
SRP54-214ENST00000630962 YDJCA8MPS7 323 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 M0R296 226 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 TBCAO75347 108 aaKnown RBP2.48□□□□□ -2.01
SRP54-214ENST00000630962 LY6G6DO95868 133 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 GSTA2P09210 222 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 KLK2P20151 261 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 ACKR3P25106 362 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 SLC3A1Q07837 685 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 RNF212Q495C1 297 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 NHLRC3Q5JS37 347 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 C1orf189Q5VU69 101 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 PET117Q6UWS5 81 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 C17orf107Q6ZR85 190 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 MSANTD1Q6ZTZ1 278 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 NUFIP2Q7Z417 695 aaKnown RBP2.48□□□□□ -2.01
SRP54-214ENST00000630962 C5orf24Q7Z6I8 188 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 PARP8Q8N3A8 854 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 ZNF781Q8N8C0 355 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 MRAPQ8TCY5 172 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 AFAP1L1Q8TED9 768 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 TCP11Q8WWU5 503 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 SLC35C1Q96A29 364 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 RCHY1Q96PM5 261 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 IDI2Q9BXS1 227 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 EDEM3Q9BZQ6 932 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 ST6GALNAC4Q9H4F1 302 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 PLEKHA3Q9HB20 300 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 MED17Q9NVC6 651 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 SLCO1C1Q9NYB5 712 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 MIS18AQ9NYP9 233 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 ADAM22Q9P0K1 906 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 CLIP2Q9UDT6 1046 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 CIDEBQ9UHD4 219 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 ITGA11Q9UKX5 1188 aa2.48□□□□□ -2.01
SRP54-214ENST00000630962 ZNF256Q9Y2P7 627 aaPredicted RBP2.48□□□□□ -2.01
SRP54-214ENST00000630962 TRBV5-4A0A0C4DH59 114 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 FAM168BA1KXE4 195 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 GLTPD2A6NH11 291 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 FOXI3A8MTJ6 420 aaPredicted RBP2.47□□□□□ -2.01
SRP54-214ENST00000630962 H7C0S8 307 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 SLC30A4O14863 429 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 P2RX6O15547 441 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 FRAT2O75474 233 aaPredicted RBP2.47□□□□□ -2.01
SRP54-214ENST00000630962 OR6B1O95007 311 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 RLN1P04808 185 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 FAM58BPP0C7Q3 252 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 SCG2P13521 617 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 CASTP20810 708 aaKnown RBP2.47□□□□□ -2.01
SRP54-214ENST00000630962 BDNFP23560 247 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 PSMB4P28070 264 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 PPP2R1BP30154 601 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 GP5P40197 560 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 BACE1P56817 501 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 BTG1P62324 171 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 GPR50Q13585 617 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 PSMD6Q15008 389 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 ZNF770Q6IQ21 691 aaPredicted RBP2.47□□□□□ -2.01
SRP54-214ENST00000630962 TMEM182Q6ZP80 229 aaPredicted RBP2.47□□□□□ -2.01
SRP54-214ENST00000630962 RAPH1Q70E73 1250 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 VASH2Q86V25 355 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 CREBRFQ8IUR6 639 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 ZC3H3Q8IXZ2 948 aaKnown RBP2.47□□□□□ -2.01
SRP54-214ENST00000630962 THNSL1Q8IYQ7 743 aa2.47□□□□□ -2.01
SRP54-214ENST00000630962 ARL14Q8N4G2 192 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms