RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 MANBAO00462 879 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 OR7A17O14581 309 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ACOX3O15254 700 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 EEF1B2P24534 225 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 RPS15AP62244 130 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 DMPKQ09013 629 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 C3orf38Q5JPI3 329 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 LIPJQ5W064 366 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 LETMD1Q6P1Q0 360 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 RGMAQ96B86 450 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 VPS50Q96JG6 964 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 AGPAT4Q9NRZ5 378 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 OLAHQ9NV23 265 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 TRPC4Q9UBN4 977 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 BLOC1S6Q9UL45 172 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ACACAQ13085 2346 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 EFCAB7A8K855 629 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 NUDT21O43809 227 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZNF806P0C7X5 589 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZNF23P17027 643 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 IL1RNP18510 177 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 CPN2P22792 545 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 PTX3P26022 381 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 SOX11P35716 441 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 BUD31P41223 144 aaPredicted RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 CCL7P80098 99 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ROR2Q01974 943 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 KIAA0040Q15053 153 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 SMU1Q2TAY7 513 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 ADGRG5Q8IZF4 528 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 SLC25A45Q8N413 288 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 C1orf52Q8N6N3 182 aaKnown RBP11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 OR2L3Q8NG85 312 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 PROKR1Q8TCW9 393 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 METTL21AQ8WXB1 218 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 OR52E6Q96RD3 313 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 F2RL3Q96RI0 385 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 RBCK1Q9BYM8 510 aa11.89□□□□□ -0.51
SYNGAP1-207ENST00000628646 SPTA1P02549 2419 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 TRIM64A6NGJ6 449 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 EEDO75530 441 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 C2orf80Q0P641 193 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 NRF1Q16656 503 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 ERMP1Q7Z2K6 904 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 MCATQ8IVS2 390 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 NUDT8Q8WV74 236 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 RUBCNLQ9H714 662 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 PTBP2Q9UKA9 531 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 SPAARA0A1B0GVQ0 90 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 TLCD2A6NGC4 264 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 CLDN4O14493 209 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 KLK1P06870 262 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 PPIBP23284 216 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 ASMTP46597 345 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 UFM1P61960 85 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 LIPEQ05469 1076 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 SLC13A2Q13183 592 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 DPY19L1Q2PZI1 675 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 C6orf136Q5SQH8 315 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 FAAH2Q6GMR7 532 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 PPP4R4Q6NUP7 873 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 RBM44Q6ZP01 1051 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 AMIGO2Q86SJ2 522 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 GOLM1Q8NBJ4 401 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZFPM2Q8WW38 1151 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 NUDT22Q9BRQ3 303 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 ATAD3AQ9NVI7 634 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 SLC39A1Q9NY26 324 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 EPHA6Q9UF33 1036 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 PLCL2Q9UPR0 1127 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 SPTBP11277 2137 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 TMX2-CTNND1H3BSU7 103 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 RTCAO00442 366 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 TIPRLO75663 272 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 RSL1D1O76021 490 aaKnown RBP11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 RXRGP48443 463 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 PRKAG1P54619 331 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 EPS8Q12929 822 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 GRM7Q14831 915 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 FKBP9P1Q75LS8 142 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 NUDT13Q86X67 352 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 SLC44A2Q8IWA5 706 aaPredicted RBP11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 CYGBQ8WWM9 190 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 RNF145Q96MT1 663 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 CTRCQ99895 268 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 ALG2Q9H553 416 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 C1GALT1Q9NS00 363 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 FGF21Q9NSA1 209 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 USP22Q9UPT9 525 aa11.88□□□□□ -0.51
SYNGAP1-207ENST00000628646 COL4A3Q01955 1670 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 TAPBPO15533 448 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 GDF9O60383 454 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 B4GALT2O60909 372 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 CLPTM1O96005 669 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 CCNYL3P0C7X3 344 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 NTSP30990 170 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 CAPZBP47756 277 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 LSAMPQ13449 338 aa11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.87□□□□□ -0.51
SYNGAP1-207ENST00000628646 NADK2Q4G0N4 442 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms