RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 BTBD16Q32M84 506 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 PLEKHN1Q494U1 663 aaPredicted RBP15.72■□□□□ 0.11
UBE3D-208ENST00000626828 GGTA1PQ4G0N0 100 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 UNC50Q53HI1 259 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 ZNF678Q5SXM1 525 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 FRG2Q64ET8 278 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 PAPD4Q6PIY7 484 aaKnown RBP15.72■□□□□ 0.11
UBE3D-208ENST00000626828 RNF175Q8N4F7 328 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 C7orf57Q8NEG2 295 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 OR4F6Q8NGB9 312 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 BRIX1Q8TDN6 353 aaKnown RBP15.72■□□□□ 0.11
UBE3D-208ENST00000626828 MTFMTQ96DP5 389 aaKnown RBP15.72■□□□□ 0.11
UBE3D-208ENST00000626828 FRG2BQ96QU4 278 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 SERPINI1Q99574 410 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 EPN3Q9H201 632 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 ZBTB20Q9HC78 741 aaPredicted RBP15.72■□□□□ 0.11
UBE3D-208ENST00000626828 NECTIN3Q9NQS3 549 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 MS4A12Q9NXJ0 267 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 B3GNT3Q9Y2A9 372 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 IGKV3D-11A0A0A0MRZ8 115 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 TCRBV16S1A1N1A0A5B0 115 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 BLACEA4D250 179 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 SAP18O00422 153 aaKnown RBP15.71■□□□□ 0.11
UBE3D-208ENST00000626828 RTCAO00442 366 aaKnown RBP15.71■□□□□ 0.11
UBE3D-208ENST00000626828 PPP6CO00743 305 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 COPEO14579 308 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 UQCRHP07919 91 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 ITGAMP11215 1152 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 KRT4P19013 534 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 MAOAP21397 527 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 NAA20P61599 178 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 SLC18A2Q05940 514 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 IFT88Q13099 833 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 SLC13A2Q13183 592 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 SLAMF1Q13291 335 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 COLEC12Q5KU26 742 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 SLC6A19Q695T7 634 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 ZNF793Q6ZN11 406 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 LINC00696Q6ZRV3 163 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 OR2W6PQ8NHA6 318 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 DNAJB14Q8TBM8 379 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 TRPC4APQ8TEL6 797 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 MMP25Q9NPA2 562 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 STMN3Q9NZ72 180 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 AHSPQ9NZD4 102 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 PTGFRNQ9P2B2 879 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 TEKT2Q9UIF3 430 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 RAB21Q9UL25 225 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 SNX6Q9UNH7 406 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 STK38LQ9Y2H1 464 aa15.71■□□□□ 0.11
UBE3D-208ENST00000626828 PRRC2CQ9Y520 2896 aaKnown RBP15.71■□□□□ 0.11
UBE3D-208ENST00000626828 A8MUI8 341 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 MLYCDO95822 493 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 CELA2AP08217 269 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 MYL2P10916 166 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 TSPAN8P19075 237 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 SOX11P35716 441 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 H3F3CQ6NXT2 135 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 Q6ZS92 163 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 RPS27LQ71UM5 84 aaKnown RBP15.7■□□□□ 0.1
UBE3D-208ENST00000626828 SCUBE1Q8IWY4 988 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 ZCCHC7Q8N3Z6 543 aaKnown RBP15.7■□□□□ 0.1
UBE3D-208ENST00000626828 MREGQ8N565 214 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 SIRT6Q8N6T7 355 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 HAS2Q92819 552 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 L3HYPDHQ96EM0 354 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 ZNF354BQ96LW1 612 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 MAPKAP1Q9BPZ7 522 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 ELOVL6Q9H5J4 265 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 DDX31Q9H8H2 851 aaKnown RBP15.7■□□□□ 0.1
UBE3D-208ENST00000626828 KCNK13Q9HB14 408 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 NMRK1Q9NWW6 199 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 TRPS1Q9UHF7 1281 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 EMCNQ9ULC0 261 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 BSNQ9UPA5 3926 aa15.7■□□□□ 0.1
UBE3D-208ENST00000626828 DYTNA2CJ06 578 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 G3V2L1 256 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 PLPP1O14494 284 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 PLIN3O60664 434 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 PROCP04070 461 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 CPN2P22792 545 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 TLX1P31314 330 aaPredicted RBP15.69■□□□□ 0.1
UBE3D-208ENST00000626828 BSGP35613 385 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 CD97P48960 835 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 MLLT10P55197 1068 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 SLC26A5P58743 744 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 BIKQ13323 160 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 ABHD17BQ5VST6 288 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 ZYG11AQ6WRX3 759 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 GPR180Q86V85 440 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 FAM47BQ8NA70 645 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 RDH11Q8TC12 318 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 TMEM237Q96Q45 408 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 TMEM109Q9BVC6 243 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 LGALS13Q9UHV8 139 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 FBXW2Q9UKT8 454 aa15.69■□□□□ 0.1
UBE3D-208ENST00000626828 BAHCC1Q9P281 2608 aa15.68■□□□□ 0.1
UBE3D-208ENST00000626828 GCN1Q92616 2671 aaKnown RBP15.68■□□□□ 0.1
UBE3D-208ENST00000626828 A0A1B0GTL3 188 aa15.68■□□□□ 0.1
UBE3D-208ENST00000626828 A8MUA0 341 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms