RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SNAPINO95295 136 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 HTR1AP08908 422 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 CMPK1P30085 196 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 BMP8BP34820 402 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 POU4F2Q12837 409 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 METAP1DQ6UB28 335 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 KCTD9Q7L273 389 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 BMP8AQ7Z5Y6 402 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 CEACAM19Q7Z692 300 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 CERS5Q8N5B7 392 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 KCNJ9Q92806 393 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 KCNN1Q92952 543 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 PLD4Q96BZ4 506 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 GORASP2Q9H8Y8 452 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 SDR39U1Q9NRG7 319 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 PIGVQ9NUD9 493 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 GLTPQ9NZD2 209 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 POU2F3Q9UKI9 436 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 PCDHB11Q9Y5F2 797 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 TJP1Q07157 1748 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 LILRA4P59901 499 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 TAF10Q12962 218 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 MAD2L1BPQ15013 274 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 TBCEQ15813 527 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 CCDC58Q4VC31 144 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 SLC35F1Q5T1Q4 408 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 TMEM151AQ8N4L1 468 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 YIPF7Q8N8F6 280 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 POGLUT1Q8NBL1 392 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 MFSD8Q8NHS3 518 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 MAPK15Q8TD08 544 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 ELMOD3Q96FG2 381 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 CNOT2Q9NZN8 540 aaKnown RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 RNF11Q9Y3C5 154 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 LCMT2O60294 686 aaKnown RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 TPPPO94811 219 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 F7P08709 466 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 SMAD3P84022 425 aaKnown RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 RASGEF1BQ0VAM2 473 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 REM2Q8IYK8 340 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 TMEM102Q8N9M5 508 aaPredicted RBP8.59□□□□□ -1.03
VCL-206ENST00000623461 OR1F1O43749 312 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 GMFGO60234 142 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 DNAJB6O75190 326 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 ADAP00813 363 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 PDGFAP04085 211 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 BMP4P12644 408 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 GCAP28676 217 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 MC2RQ01718 297 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 ARFRP1Q13795 201 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 PUM1Q14671 1186 aaKnown RBP eCLIP8.59□□□□□ -1.03
VCL-206ENST00000623461 SLC39A4Q6P5W5 647 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 CLEC4DQ8WXI8 215 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 RIPOR3Q96MK2 946 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 GNG8Q9UK08 70 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 ZNF541Q9H0D2 1346 aa8.59□□□□□ -1.03
VCL-206ENST00000623461 ARVCFO00192 962 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 SGCEO43556 437 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 SEC14L2O76054 403 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 EPOP01588 193 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 AKR1A1P14550 325 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 INCA1Q0VD86 236 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 COX18Q8N8Q8 333 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 ZMIZ2Q8NF64 920 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 CTRCQ99895 268 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 PELOQ9BRX2 385 aaKnown RBP8.59□□□□□ -1.04
VCL-206ENST00000623461 OLAHQ9NV23 265 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 B3GNT2Q9NY97 397 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 A3GALT2U3KPV4 340 aa8.59□□□□□ -1.04
VCL-206ENST00000623461 A0A0G2JMP0 313 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 C7orf72A4D263 438 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 OR2AG2A6NM03 316 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 AGXTP21549 392 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 CORO1AP31146 461 aaKnown RBP8.58□□□□□ -1.04
VCL-206ENST00000623461 SLC6A6P31641 620 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 RAB5CP51148 216 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 INHBEP58166 350 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 RAB41Q5JT25 222 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 KRBOX4Q5JUW0 171 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 FAM46CQ5VWP2 391 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 SYPL2Q5VXT5 272 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 CNIH2Q6PI25 160 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 SSX6Q7RTT6 188 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 RETREG3Q86VR2 466 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 OR4M2Q8NGB6 313 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 FRS2Q8WU20 508 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 RGMAQ96B86 450 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 KLHL9Q9P2J3 617 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 CD300AQ9UGN4 299 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 MANSC4A6NHS7 340 aaPredicted RBP8.58□□□□□ -1.04
VCL-206ENST00000623461 LMO2P25791 158 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 ITPKBP27987 946 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 VLDLRP98155 873 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 MS4A15Q8N5U1 240 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 OR7D4Q8NG98 312 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 BBS10Q8TAM1 723 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 SLC7A13Q8TCU3 470 aa8.58□□□□□ -1.04
VCL-206ENST00000623461 RANGRFQ9HD47 186 aaPredicted RBP8.58□□□□□ -1.04
VCL-206ENST00000623461 KLHL21Q9UJP4 597 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms