RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CERS6Q6ZMG9 384 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 TMEM179BQ7Z7N9 219 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 CCDC190Q86UF4 302 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 OR8H2Q8N162 312 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 TBC1D19Q8N5T2 526 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 DBF4BQ8NFT6 615 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 PIH1D2Q8WWB5 315 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 MRPL48Q96GC5 212 aaKnown RBP11.95□□□□□ -0.5
LITAF-221ENST00000622633 TRMT2BQ96GJ1 504 aaKnown RBP11.95□□□□□ -0.5
LITAF-221ENST00000622633 OR52E6Q96RD3 313 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 CWH43Q9H720 699 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 LRTM1Q9HBL6 345 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 EXD2Q9NVH0 621 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 ENTPD4Q9Y227 616 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 FKBP7Q9Y680 259 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 MICAL3Q7RTP6 2002 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 FRMPD3Q5JV73 1810 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 A0A1B0GTQ1 180 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 SLC28A1O00337 649 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 HPRP00739 348 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 DNTTP04053 509 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 APEHP13798 732 aaKnown RBP11.95□□□□□ -0.5
LITAF-221ENST00000622633 HMGA1P17096 107 aaKnown RBP11.95□□□□□ -0.5
LITAF-221ENST00000622633 DGKAP23743 735 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 TGFBR2P37173 567 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 FADDQ13158 208 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 KCNAB2Q13303 367 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 TAB1Q15750 504 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 RUNDC3AQ59EK9 446 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 RBFAQ8N0V3 343 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 C10orf111Q8N326 155 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 ZNF555Q8NEP9 628 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 C2orf15Q8WU43 125 aaKnown RBP11.95□□□□□ -0.5
LITAF-221ENST00000622633 IPCEF1Q8WWN9 437 aaPredicted RBP11.95□□□□□ -0.5
LITAF-221ENST00000622633 RHBDF1Q96CC6 855 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 FEM1AQ9BSK4 669 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 SORBS1Q9BX66 1292 aaKnown RBP11.95□□□□□ -0.5
LITAF-221ENST00000622633 HEXA-AS1Q9H8Q6 139 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 IL26Q9NPH9 171 aa11.95□□□□□ -0.5
LITAF-221ENST00000622633 SLC22A23A1A5C7 686 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 ARVCFO00192 962 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 MANBAO00462 879 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 PGLSO95336 258 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 CLDN7O95471 211 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 RPS3P23396 243 aaKnown RBP eCLIP11.94□□□□□ -0.54e-7■■■□□ 16.1
LITAF-221ENST00000622633 PSMB9P28065 219 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 HOXA6P31267 233 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 EPHA5P54756 1037 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 SEMG2Q02383 582 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 TSC22D1Q15714 1073 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 ETFDHQ16134 617 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 FLYWCH1Q4VC44 716 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 HES5Q5TA89 166 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 RBM23Q86U06 439 aaKnown RBP11.94□□□□□ -0.5
LITAF-221ENST00000622633 RDH10Q8IZV5 341 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 ZBTB2Q8N680 514 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 SLC37A3Q8NCC5 494 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 ULK4Q96C45 1275 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 MYO19Q96H55 970 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 KLF16Q9BXK1 252 aaPredicted RBP11.94□□□□□ -0.5
LITAF-221ENST00000622633 ZFYVE1Q9HBF4 777 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 RAPGEFL1Q9UHV5 662 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 TRAPPC4Q9Y296 219 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 PNMA8CA0A1B0GUJ8 204 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 DBX1A6NMT0 343 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 HNRNPCL2B2RXH8 293 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 B4DXG7 233 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 SMAD6O43541 496 aaKnown RBP11.94□□□□□ -0.5
LITAF-221ENST00000622633 CREG1O75629 220 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 SCELO95171 688 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 B3GALT4O96024 378 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 IL6P05231 212 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 BCKDHAP12694 445 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 NUP62P37198 522 aaPredicted RBP11.94□□□□□ -0.5
LITAF-221ENST00000622633 MASP1P48740 699 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 RAB14P61106 215 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 LGALS3BPQ08380 585 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 NFATC2Q13469 925 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 CHRNA6Q15825 494 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 SPANXN2Q5MJ10 180 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 SLC6A19Q695T7 634 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 TRIM46Q7Z4K8 759 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 WFDC5Q8TCV5 224 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 NETO1Q8TDF5 533 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 CLMPQ9H6B4 373 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 BRD9Q9H8M2 597 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 LATS2Q9NRM7 1088 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 PCDHB14Q9Y5E9 798 aa11.94□□□□□ -0.5
LITAF-221ENST00000622633 CLDN24A6NM45 220 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 SGCEO43556 437 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 CA12O43570 354 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 HRO43593 1189 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 NBNO60934 754 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 PFKLP17858 780 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 DCTP40126 519 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 ELAVL2Q12926 359 aaKnown RBP11.93□□□□□ -0.5
LITAF-221ENST00000622633 MAD2L1Q13257 205 aaPredicted RBP11.93□□□□□ -0.5
LITAF-221ENST00000622633 ARHGEF7Q14155 803 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 CPSF6Q16630 551 aaKnown RBP eCLIP11.93□□□□□ -0.5
LITAF-221ENST00000622633 INO80DQ53TQ3 878 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms