RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 C21orf58P58505 322 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 MC1RQ01726 317 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 RUNX2Q13950 521 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 PGS1Q32NB8 556 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 FAM174BQ3ZCQ3 159 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 VPS26BQ4G0F5 336 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 TIGD2Q4W5G0 525 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 NIPAL1Q6NVV3 410 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 TTLL10Q6ZVT0 673 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 GPR180Q86V85 440 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 MMP21Q8N119 569 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 OR7A2PQ8NGA2 310 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 TESCQ96BS2 214 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 SPDL1Q96EA4 605 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 MAPKAP1Q9BPZ7 522 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 FAIM2Q9BWQ8 316 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 REEP4Q9H6H4 257 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 NDOR1Q9UHB4 597 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 ATG4BQ9Y4P1 393 aa16.87■□□□□ 0.29
PTCHD3-202ENST00000622555 CCDC154A6NI56 674 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 CSO75390 466 aaKnown RBP16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 KRT16P08779 473 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 FTH1P19P0C7X4 201 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 CAPN3P20807 821 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 CALB2P22676 271 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 RPL3P39023 403 aaKnown RBP16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 AVPR1BP47901 424 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 ALDH9A1P49189 494 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 DGKQP52824 942 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 ARSFP54793 590 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 HEPACAMQ14CZ8 416 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 UGT8Q16880 541 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 ISXQ2M1V0 245 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 SPANXN4Q5MJ08 99 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 HES3Q5TGS1 186 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 YOD1Q5VVQ6 348 aaPredicted RBP16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 ANKRD26P1Q6NSI1 321 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 R3HCC1LQ7Z5L2 792 aaKnown RBP16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 TMEM126BQ8IUX1 230 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 KIF2BQ8N4N8 673 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 METTL27Q8N6F8 245 aaPredicted RBP16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 OR5T3Q8NGG3 340 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 UTP4Q969X6 686 aaKnown RBP16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 VPS33AQ96AX1 596 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 CMKLR1Q99788 373 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 MIEF1Q9NQG6 463 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 PHF11Q9UIL8 331 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 EXO1Q9UQ84 846 aaKnown RBP16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 SEC16AO15027 2179 aa16.86■□□□□ 0.29
PTCHD3-202ENST00000622555 A0A1W2PR48 441 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 DNAJB6O75190 326 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 NSA2O95478 260 aaKnown RBP16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 IL6P05231 212 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 FURINP09958 794 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 CCL4P13236 92 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 ALAS2P22557 587 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 S100A3P33764 101 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 GCGRP47871 477 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 RASSF2P50749 326 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 LIM2P55344 173 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 SIM1P81133 766 aaPredicted RBP16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 DPY19L1Q2PZI1 675 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 MMEL1Q495T6 779 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 NDUFAF5Q5TEU4 345 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 PPP1R3BQ86XI6 285 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 BMPERQ8N8U9 685 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 TSPEARQ8WU66 669 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 MMABQ96EY8 250 aaPredicted RBP16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 DEPDC7Q96QD5 511 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 PRPF18Q99633 342 aaKnown RBP16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 NPLQ9BXD5 320 aaPredicted RBP16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 SLC7A5P2Q9GIP4 190 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 LYRM4Q9HD34 91 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 APMAPQ9HDC9 416 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 SH3BP4Q9P0V3 963 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 DHCR7Q9UBM7 475 aaKnown RBP16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 ATP6V1HQ9UI12 483 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 DAPP1Q9UN19 280 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 SRPK3Q9UPE1 567 aa16.85■□□□□ 0.29
PTCHD3-202ENST00000622555 DYTNA2CJ06 578 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 GABRR3A8MPY1 467 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 ANGPT2O15123 496 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 CFLARO15519 480 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 AIFM1O95831 613 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 PGRP06401 933 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 PIM1P11309 404 aaPredicted RBP16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 DDCP20711 480 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 CPN2P22792 545 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 PTPN4P29074 926 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 MC2RQ01718 297 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 SRSF11Q05519 484 aaKnown RBP16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 STX5Q13190 355 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 IL11RAQ14626 422 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 CPTPQ5TA50 214 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 C18orf63Q68DL7 685 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 PWWP2BQ6NUJ5 590 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 BPHLQ86WA6 291 aaPredicted RBP16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 TICAM1Q8IUC6 712 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 CA13Q8N1Q1 262 aa16.84■□□□□ 0.29
PTCHD3-202ENST00000622555 PPCDCQ96CD2 204 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms