RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ARHGAP42A6NI28 874 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 TCP10L2B9ZVM9 353 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 CCSO14618 274 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 OGTO15294 1046 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 SIGLEC5O15389 551 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 B3GALNT1O75752 331 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 SP1P08047 785 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 RABIFP47224 123 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 PITPNBP48739 271 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 CCZ1BP86790 482 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 CCZ1P86791 482 aaPredicted RBP4.23□□□□□ -1.73
CPNE3-213ENST00000622183 HNRNPA0Q13151 305 aaKnown RBP4.23□□□□□ -1.73
CPNE3-213ENST00000622183 MEF2DQ14814 521 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 HEPACAMQ14CZ8 416 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 CCDC40Q4G0X9 1142 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 C17orf64Q86WR6 236 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 CATSPERDQ86XM0 798 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 KLHDC8BQ8IXV7 354 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 KDM8Q8N371 416 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 ZNF274Q96GC6 653 aaPredicted RBP4.23□□□□□ -1.73
CPNE3-213ENST00000622183 NSMCE2Q96MF7 247 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 GPR137Q96N19 417 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 ZNF300Q96RE9 604 aaPredicted RBP4.23□□□□□ -1.73
CPNE3-213ENST00000622183 SPAG8Q99932 426 aaPredicted RBP4.23□□□□□ -1.73
CPNE3-213ENST00000622183 CLEC7AQ9BXN2 247 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 KRT23Q9C075 422 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 WDR13Q9H1Z4 485 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 GANQ9H2C0 597 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.23□□□□□ -1.73
CPNE3-213ENST00000622183 SPASTQ9UBP0 616 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 NARFQ9UHQ1 456 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 ECE2O60344 883 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 NME2P1O60361 137 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 MAGEC1O60732 1142 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 MT-ATP6P00846 226 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 IGHEP01854 428 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 PGK2P07205 417 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 ETS1P14921 441 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 CCNA2P20248 432 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 FCARP24071 287 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 EDNRAP25101 427 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 GIFP27352 417 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 GPR183P32249 361 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 OPRL1P41146 370 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 TNFRSF4P43489 277 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 BACE1P56817 501 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 HSPA14Q0VDF9 509 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 MTF1Q14872 753 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 EPC2Q52LR7 807 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 HERC4Q5GLZ8 1057 aaPredicted RBP4.22□□□□□ -1.73
CPNE3-213ENST00000622183 NKAIN2Q5VXU1 208 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 CAPN13Q6MZZ7 669 aaPredicted RBP4.22□□□□□ -1.73
CPNE3-213ENST00000622183 BHLHB9Q6PI77 547 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 CHMP1BQ7LBR1 199 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 TAF8Q7Z7C8 310 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 CACUL1Q86Y37 369 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 OR5M9Q8NGP3 310 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 OR4L1Q8NH43 312 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 C8orf46Q8TAG6 207 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 GPR148Q8TDV2 347 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 FBXO17Q96EF6 278 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 ERGIC2Q96RQ1 377 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 KRT12Q99456 494 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 LITAFQ99732 161 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 AGPAT1Q99943 283 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 ABCG4Q9H172 646 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 DDX28Q9NUL7 540 aaKnown RBP4.22□□□□□ -1.73
CPNE3-213ENST00000622183 TMEM181Q9P2C4 612 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 KLHL8Q9P2G9 620 aaPredicted RBP4.22□□□□□ -1.73
CPNE3-213ENST00000622183 FAM153AQ9UHL3 310 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 LNPEPQ9UIQ6 1025 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 MTF2Q9Y483 593 aaPredicted RBP4.22□□□□□ -1.73
CPNE3-213ENST00000622183 OR1A2Q9Y585 309 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 CSNK1G3Q9Y6M4 447 aa4.22□□□□□ -1.73
CPNE3-213ENST00000622183 NPIPB9F8W1W9 429 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 TLX2O43763 284 aaPredicted RBP4.21□□□□□ -1.74
CPNE3-213ENST00000622183 LRP3O75074 770 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 ANGPTL1O95841 491 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 TXNDC12O95881 172 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 EZRP15311 586 aaKnown RBP4.21□□□□□ -1.74
CPNE3-213ENST00000622183 GEMP55040 296 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 EVCP57679 992 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 SSTP61278 116 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 HERV-K104P63124 156 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 CYCSP99999 105 aaKnown RBP4.21□□□□□ -1.74
CPNE3-213ENST00000622183 DRP2Q13474 957 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 OR1C1Q15619 314 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 HLA-BQ31612 363 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 OR6B2Q6IFH4 312 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 WDR88Q6ZMY6 472 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 Q6ZRP5 223 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 RBM43Q6ZSC3 357 aaKnown RBP4.21□□□□□ -1.74
CPNE3-213ENST00000622183 USP43Q70EL4 1123 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 ZER1Q7Z7L7 766 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 ERC1Q8IUD2 1116 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 CCDC197Q8NCU1 140 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 ANKRD20A12PQ8NF67 263 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 OR6M1Q8NGM8 313 aa4.21□□□□□ -1.74
CPNE3-213ENST00000622183 RAB39BQ96DA2 213 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms