RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 COL5A1P20908 1838 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 RIF1Q5UIP0 2472 aaKnown RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 A0A0A6YYC8 382 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 A0A1W2PR48 441 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 DYTNA2CJ06 578 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 H0YIG0 161 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 I3L1I5 382 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 SGK494L7N484 410 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 AGRPO00253 132 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 DSCR3O14972 297 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 CHST10O43529 356 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 TBX19O60806 448 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 CSO75390 466 aaKnown RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 UBOX5O94941 541 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 LRATO95237 230 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 IL6P05231 212 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 IL3P08700 152 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 HBQ1P09105 142 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 FURINP09958 794 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 COX4I1P13073 169 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 CCL4P13236 92 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 IL1RNP18510 177 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 ALAS2P22557 587 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 CERS1P27544 350 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 S100A3P33764 101 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 RPL3P39023 403 aaKnown RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 AVPR1BP47901 424 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 CLNS1AP54105 237 aaKnown RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 LIM2P55344 173 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 HNRNPH2P55795 449 aaKnown RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 MC1RQ01726 317 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 SRSF11Q05519 484 aaKnown RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 KLC1Q07866 573 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 BNIP1Q12981 228 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 STX5Q13190 355 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 EIF3IQ13347 325 aaKnown RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 CYLC2Q14093 348 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 HEPACAMQ14CZ8 416 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 MAPRE2Q15555 327 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 UGT8Q16880 541 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 CPTPQ5TA50 214 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 HES3Q5TGS1 186 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 PWWP2BQ6NUJ5 590 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 PRMT9Q6P2P2 845 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 BRICD5Q6PL45 260 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 TTLL10Q6ZVT0 673 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 PRSS41Q7RTY9 318 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 R3HCC1LQ7Z5L2 792 aaKnown RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 PPP1R3BQ86XI6 285 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 PDSS2Q86YH6 399 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 OR9A4Q8NGU2 314 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 NUDT8Q8WV74 236 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 STARD8Q92502 1023 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 GFM2Q969S9 779 aaKnown RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 TESCQ96BS2 214 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 COQ8BQ96D53 544 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 MTERF3Q96E29 417 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 LIN37Q96GY3 246 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 MAPKAP1Q9BPZ7 522 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 SLC25A23Q9BV35 468 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 FAIM2Q9BWQ8 316 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 APMAPQ9HDC9 416 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 SLC52A3Q9NQ40 469 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 MS4A12Q9NXJ0 267 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 SLC39A1Q9NY26 324 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 TAS2R7Q9NYW3 318 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 TAGLN3Q9UI15 199 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 PHF11Q9UIL8 331 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 FBXW2Q9UKT8 454 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 SRPK3Q9UPE1 567 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 LOXL2Q9Y4K0 774 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 PCDHA9Q9Y5H5 950 aa7.59□□□□□ -1.19
CPNE3-209ENST00000620393 PTPRZ1P23471 2315 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-209ENST00000620393 PCNX2A6NKB5 2137 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 RALGAPA1Q6GYQ0 2036 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CCDC187A0A096LP49 1063 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 A0A1W2PP18 115 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 C1orf226A1L170 272 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CCDC154A6NI56 674 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 C9JVG2 144 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CYR61O00622 381 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SCAMP2O15127 329 aaKnown RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CFLARO15519 480 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SCRG1O75711 98 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 ATP5HO75947 161 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 KCNK5O95279 499 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CBX6O95503 412 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 ONECUT2O95948 504 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 PGRP06401 933 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 LAMP1P11279 417 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 PIM1P11309 404 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 ESRRAP11474 423 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CD46P15529 392 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 DDX5P17844 614 aaKnown RBP7.58□□□□□ -1.2
CPNE3-209ENST00000620393 DDCP20711 480 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 SDHBP21912 280 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CALB2P22676 271 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 CPN2P22792 545 aa7.58□□□□□ -1.2
CPNE3-209ENST00000620393 TLX1P31314 330 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms