RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 RAP2AP10114 183 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 HOXB3P14651 431 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-213ENST00000620219 MPIP34949 423 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 RNF144AP50876 292 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-213ENST00000620219 RAD23AP54725 363 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 SKP1P63208 163 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 OGFRL1Q5TC84 451 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-213ENST00000620219 KIAA1614Q5VZ46 1190 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 ERICH5Q6P6B1 374 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 VTCN1Q7Z7D3 282 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 CSNK1A1LQ8N752 337 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 FAM86B1Q8N7N1 296 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 ACOT4Q8N9L9 421 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 WDR20Q8TBZ3 569 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 SCN3AQ9NY46 2000 aa14.99□□□□□ -0.01
CPSF1-213ENST00000620219 SLC9B1P1A6NJY1 282 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 ARNTLO00327 626 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 NME6O75414 186 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 NPPAP01160 153 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 CHRNB1P11230 501 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 MYF5P13349 255 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 POU2F1P14859 743 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 MAPK10P53779 464 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 KIAA1024LP59773 190 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 HBA1P69905 142 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 SIM2Q14190 667 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 DLEU7Q6UYE1 221 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 COL21A1Q96P44 957 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 TSC22D3Q99576 134 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 KLHL31Q9H511 634 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 CCM2LQ9NUG4 571 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 BTBD3Q9Y2F9 522 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 A0A1W2PPC4 97 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 CDH2P19022 906 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 TNFRSF1BP20333 461 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 BCL6P41182 706 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 CDK6Q00534 326 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 MTAPQ13126 283 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 GANABQ14697 944 aaKnown RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 COQ5Q5HYK3 327 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 ABHD13Q7L211 337 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 RSC1A1Q92681 617 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 NMD3Q96D46 503 aaKnown RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 RBM18Q96H35 190 aaKnown RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 PTGES3LE9PB15 166 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 TLR4O00206 839 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 LILRB5O75023 590 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 NR2F6P10588 404 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 DSTNP60981 165 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 CSTF1Q05048 431 aaKnown RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 ADGRG5Q8IZF4 528 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 OR2A1Q8NGT9 310 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 NETO1Q8TDF5 533 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 MUC13Q9H3R2 512 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 TRIOO75962 3097 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 RP1L1Q8IWN7 2480 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 CHURC1-FNTBB4DL54 471 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 PLPP1O14494 284 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 UGT2B7P16662 529 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 FNTBP49356 437 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 FBXL20Q96IG2 436 aa14.98□□□□□ -0.01
CPSF1-213ENST00000620219 GPATCH1Q9BRR8 931 aaKnown RBP14.98□□□□□ -0.01
CPSF1-213ENST00000620219 AHCTF1Q8WYP5 2266 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 BCAT2O15382 392 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-213ENST00000620219 PROS1P07225 676 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 UMPSP11172 480 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 HTR1EP28566 365 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 PKLRP30613 574 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 CDH15P55291 814 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 PHC1P78364 1004 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 VMACQ2NL98 169 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 C10orf62Q5T681 223 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-213ENST00000620219 TMBIM1Q969X1 311 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 ZFYVE21Q9BQ24 234 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 KIR3DX1Q9H7L2 352 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 HCN3Q9P1Z3 774 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 OR10H1Q9Y4A9 318 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 HS3ST3A1Q9Y663 406 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 COL4A4P53420 1690 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-213ENST00000620219 IDH2P48735 452 aaKnown RBP14.97□□□□□ -0.01
CPSF1-213ENST00000620219 TMEM107Q6UX40 140 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 VOPP1Q96AW1 172 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 SLCO4A1Q96BD0 722 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 SMURF2Q9HAU4 748 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 SLC25A37Q9NYZ2 338 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 PDP1Q9P0J1 537 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-213ENST00000620219 ZNF624Q9P2J8 865 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-213ENST00000620219 PDP2Q9P2J9 529 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 FABP3P05413 133 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 HPGDP15428 266 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 XKP51811 444 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 NKAIN2Q5VXU1 208 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 WDR53Q7Z5U6 358 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-213ENST00000620219 TRIM69Q86WT6 500 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 METTL4Q8N3J2 472 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 DNAJB8Q8NHS0 232 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 PHF10Q8WUB8 498 aaKnown RBP14.97□□□□□ -0.01
CPSF1-213ENST00000620219 RMND5BQ96G75 393 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-213ENST00000620219 ZNF583Q96ND8 569 aa14.97□□□□□ -0.01
CPSF1-213ENST00000620219 EXD2Q9NVH0 621 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms