RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CLEC1BQ9P126 229 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 IGKV1-8A0A0C4DH67 115 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 NME6O75414 186 aaPredicted RBP11.83□□□□□ -0.52
CIITA-212ENST00000618207 HPRP00739 348 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 CRHBPP24387 322 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 NTSR1P30989 418 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 HLCSP50747 726 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 TP53BP2Q13625 1128 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 SPDYE7PQ495Y7 208 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 SDE2Q6IQ49 451 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 GPR153Q6NV75 609 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 OR52E1Q8NGJ3 308 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 TSACCQ96A04 125 aaPredicted RBP11.83□□□□□ -0.52
CIITA-212ENST00000618207 ELSPBP1Q96BH3 223 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 METTL2AQ96IZ6 378 aaKnown RBP11.83□□□□□ -0.52
CIITA-212ENST00000618207 MS4A8Q9BY19 250 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 CHST8Q9H2A9 424 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 KRT84Q9NSB2 600 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 SPHK1Q9NYA1 384 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 WARS2Q9UGM6 360 aaKnown RBP11.83□□□□□ -0.52
CIITA-212ENST00000618207 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 NARSO43776 548 aaKnown RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 ERAL1O75616 437 aaKnown RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 EML2O95834 649 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 DNAJA1P31689 397 aaKnown RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 SSR2P43308 183 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 CDK9P50750 372 aaKnown RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 CCR3P51677 355 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 PRKAG1P54619 331 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 CDH12P55289 794 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 CDK6Q00534 326 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 ZBED5Q49AG3 693 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 ENPP7Q6UWV6 458 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 CEACAM20Q6UY09 585 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 CAMKMTQ7Z624 323 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 LSRQ86X29 649 aaPredicted RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 TTC29Q8NA56 475 aaPredicted RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 PIK3C3Q8NEB9 887 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 OR4E2Q8NGC2 313 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 TAMM41Q96BW9 452 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 TM4SF18Q96CE8 201 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 PDXPQ96GD0 296 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 KCNC2Q96PR1 638 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 ZNF717Q9BY31 904 aaPredicted RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 KLHL25Q9H0H3 589 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 AHSPQ9NZD4 102 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 GMEB1Q9Y692 573 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 ISM1B1AKI9 464 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 C8orf89P0DMQ9 161 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 MATN1P21941 496 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 ACSL1P33121 698 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 BSGP35613 385 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 EIF2DP41214 584 aaKnown RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 C21orf58P58505 322 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 RAB8AP61006 207 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 ISL1P61371 349 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 CSNK1G2P78368 415 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 VEZF1Q14119 521 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 ZNF750Q32MQ0 723 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 LAIR2Q6ISS4 152 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 CCDC81Q6ZN84 652 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 FBXL6Q8N531 539 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 OXR1Q8N573 874 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 PJA1Q8NG27 643 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 OR52N2Q8NGI0 321 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 OR2A1Q8NGT9 310 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 SIPA1Q96FS4 1042 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 YIPF4Q9BSR8 244 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 DOHHQ9BU89 302 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 APOOQ9BUR5 198 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 AMBNQ9NP70 447 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 GMPPBQ9Y5P6 360 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 A0A1W2PPW3 197 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 TMEM229AB2RXF0 380 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 NDUFS4O43181 175 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 TNFRSF21O75509 655 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 ATE1O95260 518 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 BCHEP06276 602 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 FPR1P21462 350 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 CLK3P49761 638 aaKnown RBP11.82□□□□□ -0.52
CIITA-212ENST00000618207 SPIBQ01892 262 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 BROXQ5VW32 411 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 TRIM40Q6P9F5 258 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 KIAA1958Q8N8K9 716 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 C7orf34Q96L11 122 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 NLNQ9BYT8 704 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 LHX9Q9NQ69 397 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 C1GALT1Q9NS00 363 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 RLIMQ9NVW2 624 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 USE1Q9NZ43 259 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 FBXW2Q9UKT8 454 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 ACSL5Q9ULC5 683 aa11.82□□□□□ -0.52
CIITA-212ENST00000618207 A0A1W2PQF6 199 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 PRAMEF25A6NGN4 478 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 CACNB4O00305 520 aaPredicted RBP11.81□□□□□ -0.52
CIITA-212ENST00000618207 ANGPTL1O95841 491 aa11.81□□□□□ -0.52
CIITA-212ENST00000618207 PPIBP23284 216 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms