RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TUBA1BP68363 451 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 KIAA0040Q15053 153 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 TPRG1LQ5T0D9 272 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 CDC73Q6P1J9 531 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 TUBA1AQ71U36 451 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 GET4Q7L5D6 327 aaPredicted RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF513Q8N8E2 541 aaPredicted RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 ENKURQ8TC29 256 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 KLHL6Q8WZ60 621 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 RGMAQ96B86 450 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMEM19Q96HH6 336 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 DIRAS2Q96HU8 199 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 DPH7Q9BTV6 452 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 C11orf16Q9NQ32 467 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM86C1Q9NVL1 165 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 GIN1Q9NXP7 522 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 DNAJC27Q9NZQ0 273 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 IL36AQ9UHA7 158 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 EDDM13A0A1B0GTR0 161 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM240BA0A1B0GVZ2 78 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 CENPXA8MT69 81 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 HSD17B2P37059 387 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 SELENOWP63302 87 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 PIN1Q13526 163 aaPredicted RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 GINS1Q14691 196 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRSS48Q7RTY5 328 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR8J2Q8NGG1 315 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 TEX47Q8TBZ9 253 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 UBTD2Q8WUN7 234 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 SIPA1Q96FS4 1042 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 ITPAQ9BY32 194 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC6A16Q9GZN6 736 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 PTGFRNQ9P2B2 879 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 SNX7Q9UNH6 387 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 WBP11Q9Y2W2 641 aaKnown RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 PCDHGA2Q9Y5H1 932 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 PHIPQ8WWQ0 1821 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 ECM29Q5VYK3 1845 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 CLCA1A8K7I4 914 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 HAT1O14929 419 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 PCDHGA12O60330 932 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 GPR37L1O60883 481 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 PFKLP17858 780 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 FUT4P22083 530 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 DDX6P26196 483 aaKnown RBP eCLIP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 CSTF2P33240 577 aaKnown RBP eCLIP5.4□□□□□ -1.554e-7■■■■■ 32.6
SYNCRIP-204ENST00000616122 SLC35A2P78381 396 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 CBX3Q13185 183 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 SPHARQ15513 63 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 TAB1Q15750 504 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 ANKDD1AQ495B1 522 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 GGTA1PQ4G0N0 100 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 TRIQKQ629K1 86 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 TRAF7Q6Q0C0 670 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF730Q6ZMV8 503 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 SAMD14Q8IZD0 417 aaPredicted RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 TBC1D15Q8TC07 691 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 HERVK_113Q902F9 699 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 PPP1R14BQ96C90 147 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 CAMK1GQ96NX5 476 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 FBXL12Q9NXK8 326 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 CXXC1Q9P0U4 656 aaPredicted RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 DNMT3BQ9UBC3 853 aaKnown RBP5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 MAFFQ9ULX9 164 aa5.4□□□□□ -1.55
SYNCRIP-204ENST00000616122 MUC6Q6W4X9 2439 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 LY75O60449 1722 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GSAPA4D1B5 854 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ANTXRLA6NF34 631 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GFYI3L273 518 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CXCL10P02778 98 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 MMP12P39900 470 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GSTM5P46439 218 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GIPRP48546 466 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ERVFC1P60507 584 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 GRHL2Q6ISB3 625 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 NXPE4Q6UWF7 544 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PLEKHM3Q6ZWE6 761 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR5AR1Q8NGP9 310 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAR1Q8WVX9 515 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR5P2Q8WZ92 322 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 HPS1Q92902 700 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 UCK2Q9BZX2 261 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 NMNAT1Q9HAN9 279 aaPredicted RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ABCB9Q9NP78 766 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 MBD1Q9UIS9 605 aaPredicted RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 NCKAP1Q9Y2A7 1128 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 IRAK3Q9Y616 596 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.39□□□□□ -1.556e-7■■■□□ 18.1
SYNCRIP-204ENST00000616122 TRIP12Q14669 1992 aaPredicted RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ASPDHA6ND91 283 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMEM202A6NGA9 273 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 DUXAA6NLW8 204 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 AGAP14A8MT82 685 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CASKO14936 926 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 CCNKO75909 580 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 APOL3O95236 402 aa5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 WISP3O95389 354 aaPredicted RBP5.39□□□□□ -1.55
SYNCRIP-204ENST00000616122 ADAP00813 363 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms