RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 HMGN1P05114 100 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 DCNP07585 359 aaKnown RBP12.53□□□□□ -0.4
FOXN3-219ENST00000615335 IFI30P13284 250 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 C6P13671 934 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 IL2P60568 153 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 EMX2Q04743 252 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 CACNG1Q06432 222 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 IL18R1Q13478 541 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 GALEQ14376 348 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 MEP1AQ16819 746 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TMEM52BQ4KMG9 183 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 SPANXN2Q5MJ10 180 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 C6orf136Q5SQH8 315 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 PSAPL1Q6NUJ1 521 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 KIF18BQ86Y91 864 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 SLC22A15Q8IZD6 547 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 CLEC4FQ8N1N0 589 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TSTD1Q8NFU3 115 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 LINGO1Q96FE5 620 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 HHIPQ96QV1 700 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 SEPHS2Q99611 448 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 NTN4Q9HB63 628 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 RANGRFQ9HD47 186 aaPredicted RBP12.53□□□□□ -0.4
FOXN3-219ENST00000615335 CD93Q9NPY3 652 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 ITM2CQ9NQX7 267 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 INTS7Q9NVH2 962 aaKnown RBP12.53□□□□□ -0.4
FOXN3-219ENST00000615335 FAM118AQ9NWS6 357 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 EIF2B4Q9UI10 523 aaKnown RBP12.53□□□□□ -0.4
FOXN3-219ENST00000615335 KLHL21Q9UJP4 597 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 NIPSNAP2O75323 286 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TRIM3O75382 744 aaPredicted RBP12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TSPAN12O95859 305 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 NPPAP01160 153 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 MT-ND1P03886 318 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 ITGALP20701 1170 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 HK3P52790 923 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 PTPN5P54829 565 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 SCRN3Q0VDG4 424 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 IKZF1Q13422 519 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 NFATC2Q13469 925 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 CHRNA6Q15825 494 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 ATP6AP1LQ52LC2 224 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 IGSF11Q5DX21 431 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TMEM65Q6PI78 240 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 USP30Q70CQ3 517 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 SNX20Q7Z614 316 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 PIANPQ8IYJ0 282 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 EID3Q8N140 333 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 CDYL2Q8N8U2 506 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 EEF1AKMT1Q8WVE0 214 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 KLHL6Q8WZ60 621 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 MAGEB10Q96LZ2 347 aaPredicted RBP12.53□□□□□ -0.4
FOXN3-219ENST00000615335 SECISBP2Q96T21 854 aaKnown RBP12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TMEM168Q9H0V1 697 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 PIF1Q9H611 641 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TMEM45AQ9NWC5 275 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TMPRSS11EQ9UL52 423 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 FZD4Q9ULV1 537 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 USP22Q9UPT9 525 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TRAPPC4Q9Y296 219 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 V9GYQ6 96 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 DOCK9Q9BZ29 2069 aa12.53□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3DA0A087WVF3 549 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3IA0A087WXS9 549 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3EA0A087X179 549 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3KA0A087X1G2 549 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3FA6NER0 549 aaPredicted RBP12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3LB9A6J9 549 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 E2F3O00716 465 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 GAPDHSO14556 408 aaPredicted RBP12.52□□□□□ -0.4
FOXN3-219ENST00000615335 YKT6O15498 198 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 PLRG1O43660 514 aaKnown RBP12.52□□□□□ -0.4
FOXN3-219ENST00000615335 RECQL5O94762 991 aaPredicted RBP12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3HP0C7X1 549 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 HRH2P25021 359 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TTPAP49638 278 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 CLK1P49759 484 aaKnown RBP12.52□□□□□ -0.4
FOXN3-219ENST00000615335 GZMKP49863 264 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TPMTP51580 245 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 PIGFQ07326 219 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 CD47Q08722 323 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 SIGLEC14Q08ET2 396 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 PRKG2Q13237 762 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 BCL7AQ4VC05 210 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 OTUD3Q5T2D3 398 aaPredicted RBP12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3GQ6DHY5 549 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3CQ6IPX1 549 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBPL2Q6SJ96 375 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 PRSS42Q7Z5A4 293 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TECPR1Q7Z6L1 1165 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 ZFAND4Q86XD8 727 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TBC1D3Q8IZP1 549 aaPredicted RBP12.52□□□□□ -0.4
FOXN3-219ENST00000615335 PROKR1Q8TCW9 393 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 RPL3LQ92901 407 aaKnown RBP12.52□□□□□ -0.4
FOXN3-219ENST00000615335 CLDN23Q96B33 292 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 TESCQ96BS2 214 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 AP2M1Q96CW1 435 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 COQ10AQ96MF6 247 aa12.52□□□□□ -0.4
FOXN3-219ENST00000615335 NSMCE2Q96MF7 247 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms