RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 CCL19Q99731 98 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CNPPD1Q9BV87 410 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FAM96AQ9H5X1 160 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SYNPO2LQ9H987 977 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 DEPPQ9NTK1 212 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 C20orf96Q9NUD7 363 aaPredicted RBP6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ZDHHC18Q9NUE0 388 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 INTS7Q9NVH2 962 aaKnown RBP6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 NSMCE4AQ9NXX6 385 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 MOCS1Q9NZB8 636 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 C19orf25Q9UFG5 118 aaPredicted RBP6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 DMGDHQ9UI17 866 aaKnown RBP6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 KLK4Q9Y5K2 254 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 LIPGQ9Y5X9 500 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 EML6Q6ZMW3 1958 aa6.67□□□□□ -1.34
PTCHD3P1-201ENST00000612350 NOTCH1P46531 2555 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ESYT3A0FGR9 886 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FEZF1A0PJY2 475 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 OR2W5A6NFC9 320 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 OR51F1A6NGY5 319 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ARHGEF33A8MVX0 844 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 AQP7O14520 342 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 LIN7AO14910 233 aaPredicted RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SLU7O95391 586 aaKnown RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TP53P04637 393 aaPredicted RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TUBBP07437 444 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CD9P21926 228 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SOX18P35713 384 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 MAGEA4P43358 317 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CDKN1CP49918 316 aaPredicted RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TAS2R50P59544 299 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PPIAP62937 165 aaKnown RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SNRPNP63162 240 aaKnown RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 MAT1AQ00266 395 aaKnown RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 GRB7Q14451 532 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SLMAPQ14BN4 828 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SF1Q15637 639 aaKnown RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 HYAL4Q2M3T9 481 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 HSP90AA5PQ58FG0 334 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ZNF470Q6ECI4 717 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PAPD4Q6PIY7 484 aaKnown RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CES3Q6UWW8 571 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 RNF44Q7L0R7 432 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TRILQ7L0X0 811 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 MDGA2Q7Z553 956 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SLC26A11Q86WA9 606 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 IGDCC3Q8IVU1 814 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ARMC10Q8N2F6 343 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 KIF2BQ8N4N8 673 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 OTUD6BQ8N6M0 293 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 C2CD4AQ8NCU7 369 aaPredicted RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CDKL2Q92772 493 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SLC22A18Q96BI1 424 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CERS2Q96G23 380 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CABS1Q96KC9 395 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FMO2Q99518 471 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ADAM19Q9H013 955 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 P2RY12Q9H244 342 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CCDC68Q9H2F9 335 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SAYSD1Q9NPB0 183 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 JKAMPQ9P055 326 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 KLHL42Q9P2K6 505 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ZNF629Q9UEG4 869 aaPredicted RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CDC42EP3Q9UKI2 254 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CORO1CQ9ULV4 474 aaPredicted RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CHMP2BQ9UQN3 213 aa6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 RUVBL1Q9Y265 456 aaKnown RBP6.66□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ROS1P08922 2347 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 A0A0A6YYC8 382 aaPredicted RBP6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FAM166BA8MTA8 275 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 H0YGG7 62 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 I3L1I5 382 aaPredicted RBP6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SLC16A5O15375 505 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 OR1I1O60431 355 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 GLSO94925 669 aaPredicted RBP6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FKBP9O95302 570 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 APOA4P06727 396 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ANXA5P08758 320 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PRSS56P0CW18 603 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 GABRA1P14867 456 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 STX2P32856 288 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PHBP35232 272 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SKIV2L2P42285 1042 aaKnown RBP6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SLC1A2P43004 574 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 AGTR2P50052 363 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ZNF136P52737 540 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SLC26A5P58743 744 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ARF3P61204 181 aaPredicted RBP6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 MGAT5Q09328 741 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 NAB1Q13506 487 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SEMA3AQ14563 771 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 USP10Q14694 798 aaKnown RBP6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TRADDQ15628 312 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SFT2D3Q587I9 215 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TEDDM1Q5T9Z0 273 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PTRHD1Q6GMV3 140 aaKnown RBP6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 UGT3A1Q6NUS8 523 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 RGS9BPQ6ZS82 235 aa6.65□□□□□ -1.34
PTCHD3P1-201ENST00000612350 C3orf62Q6ZUJ4 267 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 638.1 ms