RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PROKR1Q8TCW9 393 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 UBTD2Q8WUN7 234 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 ESAMQ96AP7 390 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 KIAA1143Q96AT1 154 aaPredicted RBP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 CLIP3Q96DZ5 547 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 HOPXQ9BPY8 73 aaPredicted RBP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 DPH2Q9BQC3 489 aaPredicted RBP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 TMEM79Q9BSE2 394 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 NDC1Q9BTX1 674 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 CD244Q9BZW8 370 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 BRINP2Q9C0B6 783 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 PELI2Q9HAT8 420 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 DNAJC11Q9NVH1 559 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 RIC8BQ9NVN3 520 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 ADA2Q9NZK5 511 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 MAP10Q9P2G4 905 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 GIMAP2Q9UG22 337 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 RIMS3Q9UJD0 308 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 SH2B3Q9UQQ2 575 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 TIMM22Q9Y584 194 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 LOC105369274A0A096LPK9 316 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 LOC102723532A0A0G2JNH3 316 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 TEX51A0A1B0GUA7 166 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 PRORSD1PA6NEY8 169 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 MEN1O00255 615 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 CLGNO14967 610 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 OR4F21O95013 312 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 EIF2S1P05198 315 aaKnown RBP8.39□□□□□ -1.07
SMAD4-217ENST00000611848 CTSBP07858 339 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 CAPN3P20807 821 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 AGXTP21549 392 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 CXCR2P25025 360 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 ITPKBP27987 946 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 PEX2P28328 305 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 MSX2P35548 267 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-217ENST00000611848 STAT5AP42229 794 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 GCGRP47871 477 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 ZFP36L2P47974 494 aaKnown RBP8.39□□□□□ -1.07
SMAD4-217ENST00000611848 HSPA7P48741 367 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 MRPS22P82650 360 aaKnown RBP8.39□□□□□ -1.07
SMAD4-217ENST00000611848 C18orf21Q32NC0 220 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-217ENST00000611848 SFT2D3Q587I9 215 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 IRAK1BP1Q5VVH5 260 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 GARNL3Q5VVW2 1013 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 LPCAT4Q643R3 524 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 LETMD1Q6P1Q0 360 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 NXPE4Q6UWF7 544 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 ZNF517Q6ZMY9 492 aaPredicted RBP8.39□□□□□ -1.07
SMAD4-217ENST00000611848 GOLGA7Q7Z5G4 137 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 TMPRSS11BQ86T26 416 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 TICAM1Q8IUC6 712 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 OR4N4Q8N0Y3 316 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 SNX31Q8N9S9 440 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 SLC38A9Q8NBW4 561 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 OR52B6Q8NGF0 335 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 OR2T11Q8NH01 316 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 MR1Q95460 341 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 NEIL2Q969S2 332 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 C17orf62Q9BQA9 187 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 AIF1LQ9BQI0 150 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 NLNQ9BYT8 704 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 NOL11Q9H8H0 719 aaKnown RBP8.39□□□□□ -1.07
SMAD4-217ENST00000611848 CUTCQ9NTM9 273 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 ABCD2Q9UBJ2 740 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 KCND3Q9UK17 655 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 PCDHGA4Q9Y5G9 962 aa8.39□□□□□ -1.07
SMAD4-217ENST00000611848 LOC101059948A0A1B0GTJ6 334 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 A0A1W2PP18 115 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 TCRBV3S1A0A5B6 114 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 TRBC2A0A5B9 178 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 FEZF1A0PJY2 475 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 HYKKA2RU49 373 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 MAGEA13PA6NCF6 341 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 C21orf140B9A014 251 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 K7EPI3 171 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 FXYD1O00168 92 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 NR5A2O00482 541 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 OTCP00480 354 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 CD63P08962 238 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 C1GALT1C1LP0DN25 315 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 PIM1P11309 404 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-217ENST00000611848 TCN2P20062 427 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 DLSTP36957 453 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 DIO3P55073 304 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 TMPRSS3P57727 454 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 ERVK-8P63133 956 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 DCDP81605 110 aaKnown RBP8.38□□□□□ -1.07
SMAD4-217ENST00000611848 RHDQ02161 417 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 TRAF3Q13114 568 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 GTF2H2Q13888 395 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 RCAN2Q14206 197 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 RPS6KA2Q15349 733 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 TRIP10Q15642 601 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 PRTGQ2VWP7 1150 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 VPS26BQ4G0F5 336 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 C6orf136Q5SQH8 315 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 C6orf10Q5SRN2 563 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 CATSPEREQ5SY80 951 aa8.38□□□□□ -1.07
SMAD4-217ENST00000611848 ZNF385CQ66K41 422 aaPredicted RBP8.38□□□□□ -1.07
SMAD4-217ENST00000611848 ATG9BQ674R7 924 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms