RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CACNB4O00305 520 aaPredicted RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 GPR37L1O60883 481 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CPNE6O95741 557 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ACADMP11310 421 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 RHCEP18577 417 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 MAT2AP31153 395 aaKnown RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 SCN1BQ07699 218 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 RGS1Q08116 209 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 FCHO2Q0JRZ9 810 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 LASP1Q14847 261 aaKnown RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 QPRTQ15274 297 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TMEM179BQ7Z7N9 219 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 NATD1Q8N6N6 113 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CELF5Q8N6W0 485 aaKnown RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 OR8J2Q8NGG1 315 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 OR14C36Q8NHC7 312 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 EPYCQ99645 322 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 C17orf62Q9BQA9 187 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 SERHL2Q9H4I8 314 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ZBTB20Q9HC78 741 aaPredicted RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 SERHLQ9NQF3 203 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 C5AR2Q9P296 337 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ZNF221Q9UK13 617 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CDH7Q9ULB5 785 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CCL26Q9Y258 94 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 PCDHGA10Q9Y5H3 936 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 ENPP4Q9Y6X5 453 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 EDDM13A0A1B0GTR0 161 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 KRBA1A5PL33 1030 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 RNASET2O00584 256 aaKnown RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 GPX2P18283 190 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CSTF2P33240 577 aaKnown RBP eCLIP8.32□□□□□ -1.08
LIG4-204ENST00000611712 CNR2P34972 360 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 HSD17B2P37059 387 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 FEN1P39748 380 aaKnown RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 KHKP50053 298 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 PFN3P60673 137 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 MICAQ29983 383 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CCSMST1Q4G0I0 132 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 CCSAPQ6IQ19 270 aaPredicted RBP8.32□□□□□ -1.08
LIG4-204ENST00000611712 MZT2BQ6NZ67 158 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 PLET1Q6UQ28 207 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 LIPIQ6XZB0 460 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 SLC39A5Q6ZMH5 540 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 C6orf120Q7Z4R8 191 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 FAM124AQ86V42 546 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 OR10G6Q8NH81 332 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 WDR48Q8TAF3 677 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 POF1BQ8WVV4 589 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 TMCO6Q96DC7 493 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 OTUB2Q96DC9 234 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 WDR70Q9NW82 654 aa8.32□□□□□ -1.08
LIG4-204ENST00000611712 PLXNB2O15031 1838 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 PAPPA2Q9BXP8 1791 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 IRGMA1A4Y4 181 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 FABP12A6NFH5 140 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 SLC31A1O15431 190 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 KIAA0513O60268 411 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 C8orf89P0DMQ9 161 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 C6P13671 934 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 ZNF10P21506 573 aaPredicted RBP8.31□□□□□ -1.08
LIG4-204ENST00000611712 GGT2P36268 569 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 AVPR1BP47901 424 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 COPZ1P61923 177 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 DHCR24Q15392 516 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 MZT2AQ6P582 158 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 KLHL17Q6TDP4 642 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 FAM129CQ86XR2 697 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 DENND6BQ8NEG7 585 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 OR5P2Q8WZ92 322 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 ITFG2Q969R8 447 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 SORBS1Q9BX66 1292 aaKnown RBP8.31□□□□□ -1.08
LIG4-204ENST00000611712 ASPNQ9BXN1 380 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 NDEL1Q9GZM8 345 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 WDR26Q9H7D7 661 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D17Q9HA65 648 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 CARS2Q9HA77 564 aaKnown RBP8.31□□□□□ -1.08
LIG4-204ENST00000611712 MRPS30Q9NP92 439 aaKnown RBP8.31□□□□□ -1.08
LIG4-204ENST00000611712 SLC6A13Q9NSD5 602 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 RPS6KB2Q9UBS0 482 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 CDV3Q9UKY7 258 aaKnown RBP8.31□□□□□ -1.08
LIG4-204ENST00000611712 MKLN1Q9UL63 735 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 MGAT4BQ9UQ53 548 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 KCNK6Q9Y257 313 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 SLC27A6Q9Y2P4 619 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 SMIM30A4D0T7 59 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 GSAPA4D1B5 854 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 ANKRD33BA6NCL7 494 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 HAT1O14929 419 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 TSC22D2O75157 780 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 OR12D1P0DN82 309 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 IMPA1P29218 277 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 CLK3P49761 638 aaKnown RBP8.31□□□□□ -1.08
LIG4-204ENST00000611712 ZNF45Q02386 682 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 FPGSQ05932 587 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 ZFP69Q49AA0 526 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 TUBA3EQ6PEY2 450 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 VITQ6UXI7 678 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 PLEKHG7Q6ZR37 379 aa8.31□□□□□ -1.08
LIG4-204ENST00000611712 USP51Q70EK9 711 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms