RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 KLK11Q9UBX7 282 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 ASIC3Q9UHC3 531 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 MAD2L2Q9UI95 211 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 PILRAQ9UKJ1 303 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 GPRASP1Q5JY77 1395 aa3.61□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 A0A1B0GVY2 172 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 TMEM129A0AVI4 362 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 C5orf51A6NDU8 294 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 TRIM64A6NGJ6 449 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 TRIM64BA6NI03 449 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 G3V2L1 256 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 H7C423 109 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 TFECO14948 347 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 CHUKO15111 745 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 P2RX6O15547 441 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 B4GAT1O43505 415 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 BAG2O95816 211 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 PNPP00491 289 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 GSTA2P09210 222 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 ODC1P11926 461 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 EZRP15311 586 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 UGT1A4P22310 534 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 EVCP57679 992 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 ARF5P84085 180 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 NPRL3Q12980 569 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 CALCOCO2Q13137 446 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF177Q13360 481 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 GCKRQ14397 625 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 FCN2Q15485 313 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 C3AR1Q16581 482 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 DNAJC21Q5F1R6 531 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 ALKBH5Q6P6C2 394 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 C3P1Q6ZMU1 363 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 NLRP14Q86W24 1093 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 SFRP1Q8N474 314 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 AQP11Q8NBQ7 271 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 CLEC1AQ8NC01 280 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 GANCQ8TET4 914 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 TRIM44Q96DX7 344 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 MOCOSQ96EN8 888 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 GUCD1Q96NT3 240 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 ZDHHC6Q9H6R6 413 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF665Q9H7R5 613 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 S100A14Q9HCY8 104 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 DNAJC11Q9NVH1 559 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 NUDT4Q9NZJ9 180 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 XPO7Q9UIA9 1087 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 PSORS1C1Q9UIG5 152 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 ERVK-19Q9WJR5 959 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 KCNK6Q9Y257 313 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 EXOC6BQ9Y2D4 811 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 MMP24Q9Y5R2 645 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 SNX5Q9Y5X3 404 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 SNED1Q8TER0 1413 aa3.6□□□□□ -1.83
SMCHD1-213ENST00000609587 SLC15A5A6NIM6 579 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 ANHXE9PGG2 379 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 DDX39AO00148 427 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 INPP4BO15327 924 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 PSMD3O43242 534 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 TNFSF12O43508 249 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 DCXO43602 365 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 IDH3BO43837 385 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 KERAO60938 352 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 NXPH4O95158 308 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 FGF19O95750 216 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 ANGPTL1O95841 491 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 SERPINB2P05120 415 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 ANPEPP15144 967 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 HLA-DPA1P20036 260 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 PKLRP30613 574 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 UCP2P55851 309 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 BACE1P56817 501 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 ERVK-16P61578 105 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 LASP1Q14847 261 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 SPHARQ15513 63 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 C2CD6Q53TS8 623 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 SNRNP48Q6IEG0 339 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF613Q6PF04 617 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 CD164L2Q6UWJ8 174 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF497Q6ZNH5 498 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 GDPGP1Q6ZNW5 385 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 CYP4V2Q6ZWL3 525 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 ZFAND4Q86XD8 727 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 TRPV3Q8NET8 790 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 OR52B6Q8NGF0 335 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 RNASE8Q8TDE3 154 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 GPR148Q8TDV2 347 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 GTF3AQ92664 365 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 HAS2Q92819 552 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 C18orf12Q96KH6 178 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 ZNF599Q96NL3 588 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 IWS1Q96ST2 819 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 LGMNQ99538 433 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 ACAT2Q9BWD1 397 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 TSPY26PQ9H489 355 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 KCNK13Q9HB14 408 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 UBE2TQ9NPD8 197 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 COMMD8Q9NX08 183 aa3.59□□□□□ -1.83
SMCHD1-213ENST00000609587 PLEK2Q9NYT0 353 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms