RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 HSD3B1P14060 373 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 HSD3B2P26439 372 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 CASRP41180 1078 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 SSR2P43308 183 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 KRT6CP48668 564 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 CDH13P55290 713 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 RPS13P62277 151 aaKnown RBP13.42□□□□□ -0.26
HDDC2-209ENST00000609477 EEF1A2Q05639 463 aaKnown RBP13.42□□□□□ -0.26
HDDC2-209ENST00000609477 ACTN3Q08043 901 aaPredicted RBP13.42□□□□□ -0.26
HDDC2-209ENST00000609477 Q0VFX4 171 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 ASPHQ12797 758 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 DDX39BQ13838 428 aaKnown RBP13.42□□□□□ -0.26
HDDC2-209ENST00000609477 TERF2Q15554 542 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 BANPQ8N9N5 519 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 TRPC4APQ8TEL6 797 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 APOPT1Q96IL0 206 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 CDK15Q96Q40 435 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 SLC29A3Q9BZD2 475 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 OR51B5Q9H339 312 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 DDX31Q9H8H2 851 aaKnown RBP13.42□□□□□ -0.26
HDDC2-209ENST00000609477 OXSMQ9NWU1 459 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 KCMF1Q9P0J7 381 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 TEKT2Q9UIF3 430 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 PHF11Q9UIL8 331 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 ADAM29Q9UKF5 820 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 PLLPQ9Y342 182 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 BSNQ9UPA5 3926 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 A0A0G2JN53 185 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 K7EM74 188 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 PLPP1O14494 284 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 CTNSO60931 367 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 PDGFAP04085 211 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 ENO1P06733 434 aaKnown RBP13.41□□□□□ -0.26
HDDC2-209ENST00000609477 CPA3P15088 417 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 CERS1P27544 350 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 TLX1P31314 330 aaPredicted RBP13.41□□□□□ -0.26
HDDC2-209ENST00000609477 OR4D2P58180 307 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 SFT2D3Q587I9 215 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 LETMD1Q6P1Q0 360 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 ISLR2Q6UXK2 745 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF793Q6ZN11 406 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 LANCL3Q6ZV70 420 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 GPRIN3Q6ZVF9 776 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 PAGE2Q7Z2X7 111 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 SCUBE1Q8IWY4 988 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 IQCKQ8N0W5 287 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 C4orf33Q8N1A6 199 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 ZADH2Q8N4Q0 377 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 CCDC63Q8NA47 563 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 SMC6Q96SB8 1091 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 WDR77Q9BQA1 342 aaPredicted RBP13.41□□□□□ -0.26
HDDC2-209ENST00000609477 EPS8L2Q9H6S3 715 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 MMP25Q9NPA2 562 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 PRTFDC1Q9NRG1 225 aa13.41□□□□□ -0.26
HDDC2-209ENST00000609477 LYARQ9NX58 379 aaKnown RBP13.41□□□□□ -0.26
HDDC2-209ENST00000609477 DOCK10Q96BY6 2186 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 SERTM1A2A2V5 107 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 FOXO6A8MYZ6 492 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 FAM227AF5H4B4 570 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 ULK1O75385 1050 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 ESRRBO95718 433 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 PPP2R1BP30154 601 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 BUD31P41223 144 aaPredicted RBP13.4□□□□□ -0.26
HDDC2-209ENST00000609477 NEK2P51955 445 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 BTG2P78543 158 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 CSTF3Q12996 717 aaKnown RBP13.4□□□□□ -0.26
HDDC2-209ENST00000609477 SLC13A2Q13183 592 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 SLAMF1Q13291 335 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 MFAP5Q13361 173 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 SERTAD2Q14140 314 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 BTBD16Q32M84 506 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 CFAP157Q5JU67 520 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 LIPMQ5VYY2 423 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 H3F3CQ6NXT2 135 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 PAPD4Q6PIY7 484 aaKnown RBP13.4□□□□□ -0.26
HDDC2-209ENST00000609477 GPR180Q86V85 440 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 NUDT13Q86X67 352 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 PTRH1Q86Y79 214 aaKnown RBP13.4□□□□□ -0.26
HDDC2-209ENST00000609477 SRRM1Q8IYB3 904 aaKnown RBP13.4□□□□□ -0.26
HDDC2-209ENST00000609477 GBP7Q8N8V2 638 aaPredicted RBP13.4□□□□□ -0.26
HDDC2-209ENST00000609477 SELENOMQ8WWX9 145 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 PSMF1Q92530 271 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 TANKQ92844 425 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 PNPLA2Q96AD5 504 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 MESP1Q9BRJ9 268 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 TRMOQ9BU70 441 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 RBCK1Q9BYM8 510 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF225Q9UK10 706 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 PPIEQ9UNP9 301 aaKnown RBP13.4□□□□□ -0.26
HDDC2-209ENST00000609477 SPTA1P02549 2419 aa13.4□□□□□ -0.26
HDDC2-209ENST00000609477 SCN2AQ99250 2005 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 OR2W5A6NFC9 320 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 RTCAO00442 366 aaKnown RBP13.39□□□□□ -0.27
HDDC2-209ENST00000609477 PPP6CO00743 305 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 RGS16O15492 202 aaPredicted RBP13.39□□□□□ -0.27
HDDC2-209ENST00000609477 TRIM13O60858 407 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 SEC24DO94855 1032 aaPredicted RBP13.39□□□□□ -0.27
HDDC2-209ENST00000609477 OR4F21O95013 312 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 NR1D1P20393 614 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 MAOAP21397 527 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms