RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 FAM174BQ3ZCQ3 159 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 NOTUMQ6P988 496 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 BEND4Q6ZU67 534 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 MIB1Q86YT6 1006 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 DMRTC2Q8IXT2 367 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-218ENST00000608440 OR1M1Q8NGA1 313 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 SLC13A3Q8WWT9 602 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 EXOSC8Q96B26 276 aaKnown RBP12.05□□□□□ -0.48
CTCFL-218ENST00000608440 TRIM43Q96BQ3 446 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-218ENST00000608440 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 MNTQ99583 582 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 SPOCK3Q9BQ16 436 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 DNTTIP1Q9H147 329 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 ELAC1Q9H777 363 aaKnown RBP12.05□□□□□ -0.48
CTCFL-218ENST00000608440 MBD2Q9UBB5 411 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 PRKAB1Q9Y478 270 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 LCTP09848 1927 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 LACTBL1A8MY62 500 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 SUPT3HB4E1H0 165 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 SSNA1O43805 119 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 HLA-DQB1P01920 261 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 SCG5P05408 212 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 FABP3P05413 133 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 ALPIP09923 528 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 LCN1P31025 176 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 PRMT2P55345 433 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 LCP2Q13094 533 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 GRIN2CQ14957 1233 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 EIF4HQ15056 248 aaKnown RBP12.05□□□□□ -0.48
CTCFL-218ENST00000608440 RBBP7Q16576 425 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 SOWAHAQ2M3V2 549 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 CYB5R2Q6BCY4 276 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 TMIGD1Q6UXZ0 262 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 SPATA2LQ8IUW3 424 aaPredicted RBP12.05□□□□□ -0.48
CTCFL-218ENST00000608440 BMPERQ8N8U9 685 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 TRPS1Q9UHF7 1281 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 STUB1Q9UNE7 303 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 ENTPD4Q9Y227 616 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 SLC6A5Q9Y345 797 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 LOXHD1Q8IVV2 1947 aa12.05□□□□□ -0.48
CTCFL-218ENST00000608440 SOWAHBA6NEL2 793 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 MPTX1A8MV57 137 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 PAGE1O75459 146 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 ALDOBP05062 364 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 LCP1P13796 627 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 PVALBP20472 110 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 GKP32189 559 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 EEF1A1P68104 462 aaKnown RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 FKBP1BP68106 108 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 EEF1A2Q05639 463 aaKnown RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 PTGR1Q14914 329 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 ZSWIM7Q19AV6 140 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 ZNF628Q5EBL2 1059 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 DGKKQ5KSL6 1271 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 EEF1A1P5Q5VTE0 462 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 CST9Q5W186 159 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 HAGHLQ6PII5 290 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 LIMS2Q7Z4I7 341 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 PPHLN1Q8NEY8 458 aaKnown RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 KIAA1143Q96AT1 154 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 DDOQ99489 341 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 PORCNQ9H237 461 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 METTL17Q9H7H0 456 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 LATS2Q9NRM7 1088 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 C14orf105Q9NVL8 296 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 TXNL4BQ9NX01 149 aaKnown RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 C1orf109Q9NX04 203 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 PTTG3PQ9NZH4 202 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 HCN2Q9UL51 889 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 KCNK7Q9Y2U2 307 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 YARS2Q9Y2Z4 477 aaKnown RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 TRIP11Q15643 1979 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 HYKKA2RU49 373 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 TUBAL3A6NHL2 446 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 H0YCG3 227 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 ARNTLO00327 626 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 GPR171O14626 319 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 LANCL1O43813 399 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 CD63P08962 238 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 FPR3P25089 353 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 VIPR1P32241 457 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 MAGEA2P43356 314 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 AGTR2P50052 363 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 JAK3P52333 1124 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 ATP12AP54707 1039 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 MC2RQ01718 297 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 PUM1Q14671 1186 aaKnown RBP eCLIP12.04□□□□□ -0.484e-9■■□□□ 13.1
CTCFL-218ENST00000608440 TRAM2Q15035 370 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 NOMO2Q5JPE7 1267 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 OTUD1Q5VV17 481 aaPredicted RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 ZNF549Q6P9A3 640 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 KRT74Q7RTS7 529 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 CBLN2Q8IUK8 224 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 NDRG1Q92597 394 aaKnown RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 ELMOD3Q96FG2 381 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 TRMT2BQ96GJ1 504 aaKnown RBP12.04□□□□□ -0.48
CTCFL-218ENST00000608440 PRKD2Q9BZL6 878 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 BTBD1Q9H0C5 482 aa12.04□□□□□ -0.48
CTCFL-218ENST00000608440 MPP6Q9NZW5 540 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms