RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SERPINA11Q86U17 422 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 MICU2Q8IYU8 434 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 PQLC1Q8N2U9 271 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 C10orf111Q8N326 155 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 ZFP90Q8TF47 636 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 CANT1Q8WVQ1 401 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 NSMCE2Q96MF7 247 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 LYARQ9NX58 379 aaKnown RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 ATG4BQ9Y4P1 393 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 A0A1W2PR48 441 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 SLC9B1P1A6NJY1 282 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 GSTA4O15217 222 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 PDPK1O15530 556 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 EIF2S1P05198 315 aaKnown RBP20.47■□□□□ 0.87
USP6NL-204ENST00000606752 VHLP40337 213 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 GAB1Q13480 694 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 IRAK1BP1Q5VVH5 260 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 ABHD13Q7L211 337 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 GPR155Q7Z3F1 870 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.47■□□□□ 0.87
USP6NL-204ENST00000606752 SLCO4A1Q96BD0 722 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 REXO5Q96IC2 774 aaKnown RBP20.47■□□□□ 0.87
USP6NL-204ENST00000606752 MAP3K3Q99759 626 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 RAB33BQ9H082 229 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 RPF2Q9H7B2 306 aaKnown RBP20.47■□□□□ 0.87
USP6NL-204ENST00000606752 GORASP2Q9H8Y8 452 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 FAM60AQ9NP50 221 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 EPHA6Q9UF33 1036 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 CORO2BQ9UQ03 480 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 NCOR1O75376 2440 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 CACNA1EQ15878 2313 aa20.47■□□□□ 0.87
USP6NL-204ENST00000606752 DHRS12A0PJE2 317 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 C1QCP02747 245 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 ALDH4A1P30038 563 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 CNR2P34972 360 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 FRKP42685 505 aaPredicted RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 PCBP4P57723 403 aaKnown RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 MAP7Q14244 749 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 ZC3H12BQ5HYM0 836 aaKnown RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 CEP68Q76N32 757 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 ZNF551Q7Z340 670 aaPredicted RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 DGLUCYQ7Z3D6 616 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 SLC35F3Q8IY50 421 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 OR5P2Q8WZ92 322 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 EXOSC8Q96B26 276 aaKnown RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 EFHD1Q9BUP0 239 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 CCM2LQ9NUG4 571 aaPredicted RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 FBXW2Q9UKT8 454 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 TCRBV5S2A0A599 114 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 PROM1O43490 865 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 UMPSP11172 480 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 GLB1P16278 677 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 ZNF10P21506 573 aaPredicted RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 PPM1FP49593 454 aaPredicted RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 MANFP55145 182 aaKnown RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 CYP51A1Q16850 503 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 PEAR1Q5VY43 1037 aaPredicted RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 CSNK1A1LQ8N752 337 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 ZCCHC10Q8TBK6 192 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 UCN3Q969E3 161 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 ZBED6CLQ96FA7 236 aaPredicted RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 TCTN2Q96GX1 697 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 SERINC2Q96SA4 455 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 CCDC3Q9BQI4 270 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 TACO1Q9BSH4 297 aaKnown RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 ACSS1Q9NUB1 689 aaPredicted RBP20.46■□□□□ 0.87
USP6NL-204ENST00000606752 ARMC1Q9NVT9 282 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 C5AR2Q9P296 337 aa20.46■□□□□ 0.87
USP6NL-204ENST00000606752 CABIN1Q9Y6J0 2220 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 A0A1B0GTQ1 180 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 GPIP06744 558 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 PSMA4P25789 261 aaKnown RBP20.45■□□□□ 0.86
USP6NL-204ENST00000606752 EPHA8P29322 1005 aaPredicted RBP20.45■□□□□ 0.86
USP6NL-204ENST00000606752 POLE2P56282 527 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 VSX2P58304 361 aaPredicted RBP20.45■□□□□ 0.86
USP6NL-204ENST00000606752 MTX3Q5HYI7 312 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 TMEM214Q6NUQ4 689 aaKnown RBP20.45■□□□□ 0.86
USP6NL-204ENST00000606752 FAM180BQ6P0A1 224 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 FAM92BQ6ZTR7 304 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 NCSTNQ92542 709 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 FIG4Q92562 907 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 ZDHHC12Q96GR4 267 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 MAPKAP1Q9BPZ7 522 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 SLC35A5Q9BS91 424 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 NLNQ9BYT8 704 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 TRIM4Q9C037 500 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 SLAMF7Q9NQ25 335 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 SLC35C2Q9NQQ7 365 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 UTS2RQ9UKP6 389 aa20.45■□□□□ 0.86
USP6NL-204ENST00000606752 CXCR6O00574 342 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 KCNK5O95279 499 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 AIFM1O95831 613 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 NTRK1P04629 796 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 ALOX12P18054 663 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 GPR3P46089 330 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 SNRPNP63162 240 aaKnown RBP20.44■□□□□ 0.86
USP6NL-204ENST00000606752 RGNQ15493 299 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 DEFB134Q4QY38 66 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 CPZQ66K79 652 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 MCATQ8IVS2 390 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms