RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 EIF2S3LQ2VIR3 472 aaKnown RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 HSDL1Q3SXM5 330 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC22A10Q63ZE4 541 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 STEAP3Q658P3 488 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ADNP2Q6IQ32 1131 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM81Q6P7N7 255 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 LINC00523Q86TU6 105 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 SUN3Q8TAQ9 357 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 CPA5Q8WXQ8 436 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF285Q96NJ3 590 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 RBM15Q96T37 977 aaKnown RBP eCLIP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 SERPINI1Q99574 410 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 THAP2Q9H0W7 228 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 SAV1Q9H4B6 383 aaPredicted RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 ZFP14Q9HCL3 533 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 GPR27Q9NS67 375 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 MARCH4Q9P2E8 410 aaPredicted RBP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 RWDD2AQ9UIY3 292 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 PUS1Q9Y606 427 aaKnown RBP eCLIP4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 RNF215Q9Y6U7 377 aa4.81□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM92AA1XBS5 289 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM90A7PA6NKC0 464 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 WASHC1A8K0Z3 465 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM90A22PA8MWA6 464 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM90A12PA8MX19 464 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 FAM90A23PA8MXZ1 464 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 WASH3PC4AMC7 463 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 PRR23D1E9PI22 279 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CHMP2AO43633 222 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 SELENOFO60613 162 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF780AO75290 641 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 LYPLA2O95372 231 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC16A8O95907 504 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 SMIM6P0DI80 62 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 PRR23D2P0DMB1 279 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ACHEP22303 614 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 S100PP25815 95 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CD40P25942 277 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 MC3RP41968 323 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 BST2Q10589 180 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 NFATC3Q12968 1075 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 FADDQ13158 208 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 MRPL49Q13405 166 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TMEM44Q2T9K0 475 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 AGAP6Q5VW22 663 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ANKS6Q68DC2 871 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TYW3Q6IPR3 259 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF530Q6P9A1 599 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CRTC3Q6UUV7 619 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 WASH2PQ6VEQ5 465 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TPGS1Q6ZTW0 290 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 COPS6Q7L5N1 327 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 AQP12AQ8IXF9 295 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TIGD4Q8IY51 512 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 RASGEF1AQ8N9B8 481 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CADM4Q8NFZ8 388 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 HAS2Q92819 552 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ATOH1Q92858 354 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 SNAPC3Q92966 411 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TOP1MTQ969P6 601 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 FUBP1Q96AE4 644 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 LINGO1Q96FE5 620 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 MRPL48Q96GC5 212 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 SH3YL1Q96HL8 342 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CCDC17Q96LX7 622 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CNBD2Q96M20 576 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 AGAP4Q96P64 663 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CTDSP1Q9GZU7 261 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 RACGAP1Q9H0H5 632 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 CDT1Q9H211 546 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 PLK3Q9H4B4 646 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 COG4Q9H9E3 785 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 AKIRIN1Q9H9L7 192 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 AKIP1Q9NQ31 210 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 THUMPD1Q9NXG2 353 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 SERGEFQ9UGK8 458 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ACSL5Q9ULC5 683 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TBC1D24Q9ULP9 559 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 AAR2Q9Y312 384 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 PLLPQ9Y342 182 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A087WXM4 84 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 A0A1W2PPM1 405 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ARHGAP42A6NI28 874 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 A8MUA0 341 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ANKRD66B4E2M5 251 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 EDF1O60869 148 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TULP3O75386 442 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TRAPPC2P0DI81 140 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 TRAPPC2BP0DI82 140 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 MBL2P11226 248 aaPredicted RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 MMP9P14780 707 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 IL1R2P27930 398 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 HNRNPH3P31942 346 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 EPHX2P34913 555 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 RPL35P42766 123 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 RPL7AP62424 266 aaKnown RBP4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF91Q05481 1191 aa4.8□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF33AQ06730 810 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms