RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ING5Q8WYH8 240 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 KAT2AQ92830 837 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 CREB3L1Q96BA8 519 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 FAM84AQ96KN4 292 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 WFIKKN1Q96NZ8 548 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 ACOX2Q99424 681 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 ACO2Q99798 780 aaKnown RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 H2AFJQ9BTM1 129 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 ITPAQ9BY32 194 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 HDHD2Q9H0R4 259 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 SMOC2Q9H3U7 446 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 ZNF395Q9H8N7 513 aaPredicted RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 SLAMF7Q9NQ25 335 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 ERVK13-1Q9NX77 482 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 ADA2Q9NZK5 511 aa8.52□□□□□ -1.04
COMMD3-215ENST00000602574 AKAP7Q9P0M2 348 aaPredicted RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 TMEM184BQ9Y519 407 aaPredicted RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 ZFP37Q9Y6Q3 630 aaPredicted RBP8.52□□□□□ -1.04
COMMD3-215ENST00000602574 MEGF6O75095 1541 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 CCDC195A0A1B0GUA6 201 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 PPIHO43447 177 aaKnown RBP8.52□□□□□ -1.05
COMMD3-215ENST00000602574 RECQL5O94762 991 aaPredicted RBP8.52□□□□□ -1.05
COMMD3-215ENST00000602574 AHSA1O95433 338 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 PPBPP02775 128 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 RPLP0P05388 317 aaKnown RBP8.52□□□□□ -1.05
COMMD3-215ENST00000602574 METTL15P1P0C7V9 234 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 IL7RP16871 459 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 TECP42680 631 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 CSNK1EP49674 416 aaKnown RBP8.52□□□□□ -1.05
COMMD3-215ENST00000602574 FXR2P51116 673 aaKnown RBP eCLIP8.52□□□□□ -1.05
COMMD3-215ENST00000602574 GPC5P78333 572 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 EVX2Q03828 476 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 PPP3CAQ08209 521 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 NR6A1Q15406 480 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 SBK1Q52WX2 424 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 CD276Q5ZPR3 534 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 GLYATQ6IB77 296 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 TIFABQ6ZNK6 161 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 NAA40Q86UY6 237 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 DCUN1D3Q8IWE4 304 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 NUDT10Q8NFP7 164 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 CRELD1Q96HD1 420 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 C5orf34Q96MH7 638 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 C1QTNF6Q9BXI9 259 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 CD244Q9BZW8 370 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 PDGFCQ9NRA1 345 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 POMT2Q9UKY4 750 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF330Q9Y3S2 320 aaPredicted RBP8.52□□□□□ -1.05
COMMD3-215ENST00000602574 KIAA1217Q5T5P2 1943 aa8.52□□□□□ -1.05
COMMD3-215ENST00000602574 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 MEX3AA1L020 520 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 GLTPD2A6NH11 291 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 TRDCB7Z8K6 153 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 TMEM238C9JI98 176 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 NPIPB9F8W1W9 429 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SMLR1H3BR10 107 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 DVL2O14641 736 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SIGLEC5O15389 551 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SEC22BO75396 215 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF821O75541 412 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ITGA10O75578 1167 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ABLIM3O94929 683 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SPARCP09486 303 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 CYP4B1P13584 511 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 LBPP18428 481 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 S1PR1P21453 382 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 TNFSF8P32971 234 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 MSX2P35548 267 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 YBEYP58557 167 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SLC35A2P78381 396 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 DEFA5Q01523 94 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 TSPAN31Q12999 210 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 BOP1Q14137 746 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 EIF4HQ15056 248 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SLC5A12Q1EHB4 618 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 DEFB115Q30KQ5 88 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 FASTKD1Q53R41 847 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SAXO2Q658L1 398 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ACSM5Q6NUN0 579 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 KLHL17Q6TDP4 642 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 CXXC5Q7LFL8 322 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 PIWIL4Q7Z3Z4 852 aaKnown RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 MISPQ8IVT2 679 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF555Q8NEP9 628 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 NEK7Q8TDX7 302 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 WFIKKN2Q8TEU8 576 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 C2CD4CQ8TF44 421 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 XAGE5Q8WWM1 108 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 LIPHQ8WWY8 451 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ATG4AQ8WYN0 398 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 GCDHQ92947 438 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 EEF2KMTQ96G04 330 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 CXorf58Q96LI9 332 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 NOL4LQ96MY1 436 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 SLC30A3Q99726 388 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 ZNF2Q9BSG1 426 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-215ENST00000602574 FTHL17Q9BXU8 183 aa8.51□□□□□ -1.05
COMMD3-215ENST00000602574 NXF3Q9H4D5 531 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms