RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 NEK2P51955 445 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 EXT1Q16394 746 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 PLAG1Q6DJT9 500 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 JMJD6Q6NYC1 403 aaPredicted RBP15.83■□□□□ 0.12
TRIM28-215ENST00000601150 LETMD1Q6P1Q0 360 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 PAPD4Q6PIY7 484 aaKnown RBP15.83■□□□□ 0.12
TRIM28-215ENST00000601150 IGFL3Q6UXB1 125 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 TRABD2AQ86V40 505 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 ZNF595Q8IYB9 648 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 CCDC63Q8NA47 563 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 FAM47BQ8NA70 645 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 MTFMTQ96DP5 389 aaKnown RBP15.83■□□□□ 0.12
TRIM28-215ENST00000601150 ZNF382Q96SR6 550 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 SERPINI1Q99574 410 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 LPAR4Q99677 370 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 WDR77Q9BQA1 342 aaPredicted RBP15.83■□□□□ 0.12
TRIM28-215ENST00000601150 TMEM109Q9BVC6 243 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 ELOVL6Q9H5J4 265 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 PRTFDC1Q9NRG1 225 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 MKS1Q9NXB0 559 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 KCMF1Q9P0J7 381 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 TRPS1Q9UHF7 1281 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 STK38LQ9Y2H1 464 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 SPACA6W5XKT8 324 aa15.83■□□□□ 0.12
TRIM28-215ENST00000601150 IGKV3D-11A0A0A0MRZ8 115 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 A0A1B0GTL3 188 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 TCRBV16S1A1N1A0A5B0 115 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 CYR61O00622 381 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 PLPP1O14494 284 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 CELA2AP08217 269 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 PLA2G2AP14555 144 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 HSD17B7P56937 341 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 BTBD16Q32M84 506 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 CRB2Q5IJ48 1285 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 ISLR2Q6UXK2 745 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 GPRIN3Q6ZVF9 776 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 SCUBE1Q8IWY4 988 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 ZADH2Q8N4Q0 377 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 RBMXL3Q8N7X1 1067 aaKnown RBP15.82■□□□□ 0.12
TRIM28-215ENST00000601150 APOPT1Q96IL0 206 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 CSF3RQ99062 836 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 SORBS1Q9BX66 1292 aaKnown RBP15.82■□□□□ 0.12
TRIM28-215ENST00000601150 IQCGQ9H095 443 aaKnown RBP15.82■□□□□ 0.12
TRIM28-215ENST00000601150 NECTIN3Q9NQS3 549 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 MID2Q9UJV3 735 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 SNX6Q9UNH7 406 aa15.82■□□□□ 0.12
TRIM28-215ENST00000601150 OR4F21O95013 312 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 SEMA3DO95025 777 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 ETHE1O95571 254 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 UQCRHP07919 91 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 ITGAMP11215 1152 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 CPA3P15088 417 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 HNRNPFP52597 415 aaKnown RBP15.81■□□□□ 0.12
TRIM28-215ENST00000601150 PKNOX1P55347 436 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 NAA20P61599 178 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 LCP2Q13094 533 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 SLC13A2Q13183 592 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 SLAMF1Q13291 335 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 NADK2Q4G0N4 442 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 SGO1Q5FBB7 561 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 COLEC12Q5KU26 742 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 IGFL2Q6UWQ7 119 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
TRIM28-215ENST00000601150 ZCCHC7Q8N3Z6 543 aaKnown RBP15.81■□□□□ 0.12
TRIM28-215ENST00000601150 CCNYL1Q8N7R7 359 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 BANPQ8N9N5 519 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 TMEM52Q8NDY8 209 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 M1APQ8TC57 530 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 BRIX1Q8TDN6 353 aaKnown RBP15.81■□□□□ 0.12
TRIM28-215ENST00000601150 PSMF1Q92530 271 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 LMF1Q96S06 567 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 MAPKAP1Q9BPZ7 522 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 MFRPQ9BY79 579 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 SLC29A3Q9BZD2 475 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 C12orf65Q9H3J6 166 aaKnown RBP15.81■□□□□ 0.12
TRIM28-215ENST00000601150 EPS8L2Q9H6S3 715 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 ZBTB20Q9HC78 741 aaPredicted RBP15.81■□□□□ 0.12
TRIM28-215ENST00000601150 PTGFRNQ9P2B2 879 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 ZNF225Q9UK10 706 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 FBXW2Q9UKT8 454 aa15.81■□□□□ 0.12
TRIM28-215ENST00000601150 BLACEA4D250 179 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 SYNDIG1LA6NDD5 238 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 CTNSO60931 367 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 BSGP35613 385 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 SOX11P35716 441 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 SLC26A5P58743 744 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 DNAJB13P59910 316 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 MFAP5Q13361 173 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 SLC6A19Q695T7 634 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 SIRT6Q8N6T7 355 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 CDYL2Q8N8U2 506 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 SELENOMQ8WWX9 145 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 PNPLA2Q96AD5 504 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 EPN3Q9H201 632 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 GSTO2Q9H4Y5 243 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 DDX31Q9H8H2 851 aaKnown RBP15.8■□□□□ 0.12
TRIM28-215ENST00000601150 OXSMQ9NWU1 459 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 MS4A12Q9NXJ0 267 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 PHF11Q9UIL8 331 aa15.8■□□□□ 0.12
TRIM28-215ENST00000601150 PLLPQ9Y342 182 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms