RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SCIMPQ6UWF3 145 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 CCDC81Q6ZN84 652 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 ATG14Q6ZNE5 492 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 SPACA3Q8IXA5 215 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 CA13Q8N1Q1 262 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 FAM76AQ8TAV0 307 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 VPS50Q96JG6 964 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 MRPL1Q9BYD6 325 aaKnown RBP18.49■□□□□ 0.55
CIRBP-220ENST00000588917 RIC8BQ9NVN3 520 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 SIRT5Q9NXA8 310 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 PTRH2Q9Y3E5 179 aaKnown RBP18.49■□□□□ 0.55
CIRBP-220ENST00000588917 SDK2Q58EX2 2172 aa18.49■□□□□ 0.55
CIRBP-220ENST00000588917 CLDN4O14493 209 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 CREG1O75629 220 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 KLK1P06870 262 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 LINC00032P0C843 101 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 ATXN8OSP0DMR3 200 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 LIM2P55344 173 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 RAB38P57729 211 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 SNRPNP63162 240 aaKnown RBP18.48■□□□□ 0.55
CIRBP-220ENST00000588917 MAT1AQ00266 395 aaKnown RBP18.48■□□□□ 0.55
CIRBP-220ENST00000588917 HMGCS1Q01581 520 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 OCRLQ01968 901 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 TUBB8Q3ZCM7 444 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 VWA2Q5GFL6 755 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 CCNYL2Q5T2Q4 361 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 RGS9BPQ6ZS82 235 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 GPR180Q86V85 440 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 OR5T3Q8NGG3 340 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 PIWIL2Q8TC59 973 aaKnown RBP18.48■□□□□ 0.55
CIRBP-220ENST00000588917 PEX11GQ96HA9 241 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 C7orf26Q96N11 449 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 IP6K3Q96PC2 410 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 ACTL8Q9H568 366 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 SEMA3GQ9NS98 782 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 CTSFQ9UBX1 484 aa18.48■□□□□ 0.55
CIRBP-220ENST00000588917 WBP11Q9Y2W2 641 aaKnown RBP18.48■□□□□ 0.55
CIRBP-220ENST00000588917 SYNDIG1LA6NDD5 238 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 TRPC5OSA6NMA1 111 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 ZNF891A8MT65 544 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-220ENST00000588917 TMEM233B4DJY2 109 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 PIP5K1BO14986 540 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 VPS4BO75351 444 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 SEC22BO75396 215 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 HEXBP07686 556 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 FHP07954 510 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 FAM58BPP0C7Q3 252 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 F8A1P23610 371 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 CERS1P27544 350 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 BUD31P41223 144 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-220ENST00000588917 GSTM5P46439 218 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 TRA2BP62995 288 aaKnown RBP18.47■□□□□ 0.55
CIRBP-220ENST00000588917 OLR1P78380 273 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 BTKQ06187 659 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 SYT16Q17RD7 645 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 GALNT18Q6P9A2 607 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 ZNF793Q6ZN11 406 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 Q6ZSR9 355 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 COMMD6Q7Z4G1 85 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 VASH2Q86V25 355 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 C1orf52Q8N6N3 182 aaKnown RBP18.47■□□□□ 0.55
CIRBP-220ENST00000588917 PPP3R2Q96LZ3 170 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 SPSB2Q99619 263 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 ZNF717Q9BY31 904 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-220ENST00000588917 TUBB1Q9H4B7 451 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 WDR41Q9HAD4 459 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 PNPOQ9NVS9 261 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 C1orf109Q9NX04 203 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 KCMF1Q9P0J7 381 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 IL17BQ9UHF5 180 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 MCM8Q9UJA3 840 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 TMED5Q9Y3A6 229 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 CCL27Q9Y4X3 112 aa18.47■□□□□ 0.55
CIRBP-220ENST00000588917 A0A0A6YYD5 115 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 HDAC3O15379 428 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 CPN2P22792 545 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 MAPK12P53778 367 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 EMP2P54851 167 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 TLE3Q04726 772 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 KLC1Q07866 573 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 NR6A1Q15406 480 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 MRM1Q6IN84 353 aaKnown RBP18.46■□□□□ 0.55
CIRBP-220ENST00000588917 RAB43Q86YS6 212 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 WDR75Q8IWA0 830 aaKnown RBP18.46■□□□□ 0.55
CIRBP-220ENST00000588917 ZC3H7AQ8IWR0 971 aaKnown RBP18.46■□□□□ 0.55
CIRBP-220ENST00000588917 PARP9Q8IXQ6 854 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 ZNF595Q8IYB9 648 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 METTL21AQ8WXB1 218 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 STARD8Q92502 1023 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 C19orf60Q96EN9 201 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 APIPQ96GX9 242 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 CRB3Q9BUF7 120 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 SORBS1Q9BX66 1292 aaKnown RBP18.46■□□□□ 0.55
CIRBP-220ENST00000588917 LRTM1Q9HBL6 345 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 C3orf18Q9UK00 162 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 FBXW2Q9UKT8 454 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 MKL2Q9ULH7 1088 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 SPTBP11277 2137 aa18.46■□□□□ 0.55
CIRBP-220ENST00000588917 GNG14A0A1W2PPG7 69 aa18.45■□□□□ 0.54
CIRBP-220ENST00000588917 ATXN7O15265 892 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms