RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 VPS37AQ8NEZ2 397 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 OR4D9Q8NGE8 314 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 LRRC58Q96CX6 371 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 COQ8BQ96D53 544 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 ITCHQ96J02 903 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 LYARQ9NX58 379 aaKnown RBP21.12■□□□□ 0.97
ATG4D-209ENST00000588857 SLC22A7Q9Y694 548 aa21.12■□□□□ 0.97
ATG4D-209ENST00000588857 SPTBP11277 2137 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 B3GALT2O43825 422 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 KCNH1O95259 989 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 DDCP20711 480 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 ALDH9A1P49189 494 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 PHC1P78364 1004 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 PLIN5Q00G26 463 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 FOXM1Q08050 763 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 KCNAB1Q14722 419 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 CLPPQ16740 277 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-209ENST00000588857 PRTGQ2VWP7 1150 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 ANXA8L1Q5VT79 327 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 PRMT9Q6P2P2 845 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 BNC2Q6ZN30 1099 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-209ENST00000588857 DHDDSQ86SQ9 333 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 DNAJB8Q8NHS0 232 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 KLHL6Q8WZ60 621 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 GTF2H4Q92759 462 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 SLC41A2Q96JW4 573 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 ZNF285Q96NJ3 590 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 ZNF768Q9H5H4 540 aaKnown RBP21.11■□□□□ 0.97
ATG4D-209ENST00000588857 TEX10Q9NXF1 929 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-209ENST00000588857 PRPF19Q9UMS4 504 aaKnown RBP21.11■□□□□ 0.97
ATG4D-209ENST00000588857 MRPS2Q9Y399 296 aaKnown RBP21.11■□□□□ 0.97
ATG4D-209ENST00000588857 ASB4Q9Y574 426 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 PCDHGA7Q9Y5G6 932 aa21.11■□□□□ 0.97
ATG4D-209ENST00000588857 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.11■□□□□ 0.97
ATG4D-209ENST00000588857 H0YHG0 523 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 CTSBP07858 339 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 DRD2P14416 443 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 NELFEP18615 380 aaKnown RBP21.1■□□□□ 0.97
ATG4D-209ENST00000588857 NDUFA9Q16795 377 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 NDUFAF5Q5TEU4 345 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 MRM1Q6IN84 353 aaKnown RBP21.1■□□□□ 0.97
ATG4D-209ENST00000588857 ZNF574Q6ZN55 896 aaPredicted RBP21.1■□□□□ 0.97
ATG4D-209ENST00000588857 TICAM1Q8IUC6 712 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 SCUBE1Q8IWY4 988 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 UTP4Q969X6 686 aaKnown RBP21.1■□□□□ 0.97
ATG4D-209ENST00000588857 GFM1Q96RP9 751 aaKnown RBP21.1■□□□□ 0.97
ATG4D-209ENST00000588857 CDRT15Q96T59 188 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 BHLHE41Q9C0J9 482 aaPredicted RBP21.1■□□□□ 0.97
ATG4D-209ENST00000588857 SPAG4Q9NPE6 437 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 FBXW2Q9UKT8 454 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 NUP214P35658 2090 aaPredicted RBP21.1■□□□□ 0.97
ATG4D-209ENST00000588857 LRRC74AQ0VAA2 488 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 CAPRIN1Q14444 709 aaKnown RBP21.1■□□□□ 0.97
ATG4D-209ENST00000588857 C8orf82Q6P1X6 216 aaPredicted RBP21.1■□□□□ 0.97
ATG4D-209ENST00000588857 TMPRSS9Q7Z410 1059 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 ANKRD46Q86W74 232 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 ULK2Q8IYT8 1036 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 EFCAB3Q8N7B9 438 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 SLC39A3Q9BRY0 314 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 ANKHQ9HCJ1 492 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 ADA2Q9NZK5 511 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 PDP2Q9P2J9 529 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 NAALAD2Q9Y3Q0 740 aa21.1■□□□□ 0.97
ATG4D-209ENST00000588857 ADAMTS20P59510 1910 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 PRSS51A0A1B0GVH4 220 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 GP1BAP07359 652 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 ANKRD34CP0C6C1 535 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 IL1RNP18510 177 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 ACP1P24666 158 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 SKP1P63208 163 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 DLEU7Q6UYE1 221 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 MMP21Q8N119 569 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 CLPTM1LQ96KA5 538 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 GPATCH1Q9BRR8 931 aaKnown RBP21.09■□□□□ 0.97
ATG4D-209ENST00000588857 SLAMF8Q9P0V8 285 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 PHF11Q9UIL8 331 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 MAN2B2Q9Y2E5 1009 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 ATG4BQ9Y4P1 393 aa21.09■□□□□ 0.97
ATG4D-209ENST00000588857 IGHV5-10-1A0A0J9YXX1 117 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 HYKKA2RU49 373 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 TMEM150CB9EJG8 249 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 FXYD1O00168 92 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 RFXANKO14593 260 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 GALR3O60755 368 aaPredicted RBP21.08■□□□□ 0.97
ATG4D-209ENST00000588857 TBX19O60806 448 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 ERN1O75460 977 aaKnown RBP21.08■□□□□ 0.97
ATG4D-209ENST00000588857 OR2B3O76000 313 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 CD59P13987 128 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 WNT3P56703 355 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 SNRPNP63162 240 aaKnown RBP21.08■□□□□ 0.97
ATG4D-209ENST00000588857 GRM7Q14831 915 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 GPR19Q15760 415 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 ZNF385BQ569K4 471 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 GARNL3Q5VVW2 1013 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 NIPAL1Q6NVV3 410 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 NAXDQ8IW45 347 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 NATD1Q8N6N6 113 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 TTC29Q8NA56 475 aaPredicted RBP21.08■□□□□ 0.97
ATG4D-209ENST00000588857 PANX1Q96RD7 426 aa21.08■□□□□ 0.97
ATG4D-209ENST00000588857 MAPKAP1Q9BPZ7 522 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms