RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 TMCO1Q9UM00 188 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 PCDHGA11Q9Y5H2 935 aa18.3■□□□□ 0.52
TPM4-208ENST00000588410 EXOC1LA0A1B0GW35 172 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 TRIM49D1C9J1S8 452 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 SAP18O00422 153 aaKnown RBP18.29■□□□□ 0.52
TPM4-208ENST00000588410 RTCAO00442 366 aaKnown RBP18.29■□□□□ 0.52
TPM4-208ENST00000588410 E2F3O00716 465 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 MAN1A2O60476 641 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 SMIM24O75264 130 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 IFNA16P05015 189 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 COL6A2P12110 1019 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 GP1BBP13224 206 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 CD46P15529 392 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 ATP5A1P25705 553 aaKnown RBP18.29■□□□□ 0.52
TPM4-208ENST00000588410 PIK3CBP42338 1070 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 MAGEA12P43365 314 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 STX4Q12846 297 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 TERF2Q15554 542 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 KHDRBS2Q5VWX1 349 aaKnown RBP18.29■□□□□ 0.52
TPM4-208ENST00000588410 METTL2BQ6P1Q9 378 aaKnown RBP18.29■□□□□ 0.52
TPM4-208ENST00000588410 GOLGA7Q7Z5G4 137 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 UBE3DQ7Z6J8 389 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 PLD6Q8N2A8 252 aaKnown RBP18.29■□□□□ 0.52
TPM4-208ENST00000588410 PTGR2Q8N8N7 351 aaPredicted RBP18.29■□□□□ 0.52
TPM4-208ENST00000588410 ACOT4Q8N9L9 421 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 TMEM52Q8NDY8 209 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 NFAM1Q8NET5 270 aaPredicted RBP18.29■□□□□ 0.52
TPM4-208ENST00000588410 B3GNT7Q8NFL0 401 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 HUS1BQ8NHY5 278 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 DCAKDQ8WVC6 231 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 NR4A3Q92570 626 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 ATP6V1E2Q96A05 226 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 CSF3RQ99062 836 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 OR51B5Q9H339 312 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 IPPKQ9H8X2 491 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 KLHL1Q9NR64 748 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 ZNF358Q9NW07 568 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 OSGIN2Q9Y236 505 aa18.29■□□□□ 0.52
TPM4-208ENST00000588410 RELNP78509 3460 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 TRBV11-1A0A0K0K1C0 115 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 LRRC14BA6NHZ5 514 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 CYR61O00622 381 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 CDK2AP1O14519 115 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 FCHO1O14526 889 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 UGDHO60701 494 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 CTNSO60931 367 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 SIX3O95343 332 aaPredicted RBP18.28■□□□□ 0.52
TPM4-208ENST00000588410 SNRPAP09012 282 aaKnown RBP18.28■□□□□ 0.52
TPM4-208ENST00000588410 RHOXF2BP0C7M4 288 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 HIST1H1TP22492 207 aaPredicted RBP18.28■□□□□ 0.52
TPM4-208ENST00000588410 EEF1DP29692 281 aaKnown RBP18.28■□□□□ 0.52
TPM4-208ENST00000588410 ST13P50502 369 aaKnown RBP18.28■□□□□ 0.52
TPM4-208ENST00000588410 CLCN2P51788 898 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 HNRNPFP52597 415 aaKnown RBP18.28■□□□□ 0.52
TPM4-208ENST00000588410 DEPDC1Q5TB30 811 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 SPINK14Q6IE38 97 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 ZNF793Q6ZN11 406 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 TRMT10CQ7L0Y3 403 aaKnown RBP18.28■□□□□ 0.52
TPM4-208ENST00000588410 RGMAQ96B86 450 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 PHF21BQ96EK2 531 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 SIGLEC12Q96PQ1 595 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 MTERF1Q99551 399 aaKnown RBP18.28■□□□□ 0.52
TPM4-208ENST00000588410 MAPKAP1Q9BPZ7 522 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 RHOXF2Q9BQY4 288 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 CCDC77Q9BR77 488 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 ADAP2Q9NPF8 381 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 LRFN1Q9P244 771 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 XPR1Q9UBH6 696 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 ERRFI1Q9UJM3 462 aaPredicted RBP18.28■□□□□ 0.52
TPM4-208ENST00000588410 PCDHGB6Q9Y5F9 930 aa18.28■□□□□ 0.52
TPM4-208ENST00000588410 ABHD2P08910 425 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 CPN2P22792 545 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 TPP2P29144 1249 aaPredicted RBP18.27■□□□□ 0.52
TPM4-208ENST00000588410 PPP2R1BP30154 601 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 MLF1P58340 268 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 CPSF6Q16630 551 aaKnown RBP eCLIP18.27■□□□□ 0.52
TPM4-208ENST00000588410 ZNF324BQ6AW86 544 aaPredicted RBP18.27■□□□□ 0.52
TPM4-208ENST00000588410 OR4C11Q6IEV9 310 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 TMEM132CQ8N3T6 1108 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 TMEM178AQ8NBL3 297 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 MDS2Q8NDY4 140 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 VMP1Q96GC9 406 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 ALOXE3Q9BYJ1 711 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 NOL11Q9H8H0 719 aaKnown RBP18.27■□□□□ 0.52
TPM4-208ENST00000588410 DMRT3Q9NQL9 472 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 KCMF1Q9P0J7 381 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 FBXW2Q9UKT8 454 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 TSC22D4Q9Y3Q8 395 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 CLCA3PQ9Y6N3 262 aa18.27■□□□□ 0.52
TPM4-208ENST00000588410 HECTD1Q9ULT8 2610 aa18.27■□□□□ 0.51
TPM4-208ENST00000588410 H0YIV9 168 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 TGFBR3LH3BV60 316 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 SCELO95171 688 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 CLDN9O95484 217 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 TNNI3P19429 210 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 PTX3P26022 381 aaPredicted RBP18.26■□□□□ 0.51
TPM4-208ENST00000588410 CYB561P49447 251 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 RPS13P62277 151 aaKnown RBP18.26■□□□□ 0.51
TPM4-208ENST00000588410 SERTAD2Q14140 314 aa18.26■□□□□ 0.51
TPM4-208ENST00000588410 ELAVL1Q15717 326 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms