RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 RNF112Q9ULX5 631 aa13.37□□□□□ -0.27
VMP1-206ENST00000587945 A0A088AWK7 358 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 RTCAO00442 366 aaKnown RBP13.36□□□□□ -0.27
VMP1-206ENST00000587945 CDK2AP1O14519 115 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 PEX1O43933 1283 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 IFNA16P05015 189 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 ZNF10P21506 573 aaPredicted RBP13.36□□□□□ -0.27
VMP1-206ENST00000587945 GSTM2P28161 218 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 MTTPP55157 894 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 HSD17B7P56937 341 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 GPR85P60893 370 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 IRF8Q02556 426 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 ILF2Q12905 390 aaKnown RBP13.36□□□□□ -0.27
VMP1-206ENST00000587945 CHIT1Q13231 466 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 TERF2Q15554 542 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 KBTBD12Q3ZCT8 623 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 CDKL4Q5MAI5 379 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 XKRXQ6PP77 449 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 ZNF793Q6ZN11 406 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 CYS1Q717R9 158 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 UBE3DQ7Z6J8 389 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 DOLPP1Q86YN1 238 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 ZNF595Q8IYB9 648 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 CYP4Z2PQ8N1L4 340 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 TMEM156Q8N614 296 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 AGAP11Q8TF27 550 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 ANP32BQ92688 251 aaKnown RBP13.36□□□□□ -0.27
VMP1-206ENST00000587945 WDR34Q96EX3 536 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 PTCD3Q96EY7 689 aaKnown RBP13.36□□□□□ -0.27
VMP1-206ENST00000587945 VMP1Q96GC9 406 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 SEC16BQ96JE7 1060 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 UBXN10Q96LJ8 280 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 PHF12Q96QT6 1004 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 COPS7BQ9H9Q2 264 aaPredicted RBP13.36□□□□□ -0.27
VMP1-206ENST00000587945 PRM3Q9NNZ6 103 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 ADAP2Q9NPF8 381 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 PRDM7Q9NQW5 492 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 DAPP1Q9UN19 280 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 KLF13Q9Y2Y9 288 aaPredicted RBP13.36□□□□□ -0.27
VMP1-206ENST00000587945 MEMO1Q9Y316 297 aa13.36□□□□□ -0.27
VMP1-206ENST00000587945 TMEM200CA6NKL6 621 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 ENO4A6NNW6 628 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 ZFAND5O76080 213 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 S100BP04271 92 aaPredicted RBP13.35□□□□□ -0.27
VMP1-206ENST00000587945 SLC35E2BP0CK96 405 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 TFEBP19484 476 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 SPRP35270 261 aaPredicted RBP13.35□□□□□ -0.27
VMP1-206ENST00000587945 MSH2P43246 934 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 SMSP52788 366 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 ID2Q02363 134 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 BMPR2Q13873 1038 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 NAA30Q147X3 362 aaPredicted RBP13.35□□□□□ -0.27
VMP1-206ENST00000587945 SLMAPQ14BN4 828 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 EFTUD2Q15029 972 aaKnown RBP eCLIP13.35□□□□□ -0.27
VMP1-206ENST00000587945 GRTP1Q5TC63 336 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 RAPH1Q70E73 1250 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 ISCA2Q86U28 154 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 ZNF321PQ8N8H1 164 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 FBXO25Q8TCJ0 367 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 FBF1Q8TES7 1133 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 EFCAB11Q9BUY7 163 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 CD244Q9BZW8 370 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 IGSF5Q9NSI5 407 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 KCMF1Q9P0J7 381 aa13.35□□□□□ -0.27
VMP1-206ENST00000587945 PPIEQ9UNP9 301 aaKnown RBP13.35□□□□□ -0.27
VMP1-206ENST00000587945 MRPS33Q9Y291 106 aaKnown RBP13.35□□□□□ -0.27
VMP1-206ENST00000587945 SUPT3HB4E1H0 165 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 C19orf84I3L1E1 186 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 UBXN8O00124 270 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 SAP18O00422 153 aaKnown RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 ADAM10O14672 748 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 TFECO14948 347 aaPredicted RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 HS6ST1O60243 411 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 CTNSO60931 367 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 LDB3O75112 727 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 SUPT3HO75486 399 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 OR2J2O76002 312 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 TGFB1P01137 390 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 GSTA2P09210 222 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 PCNAP12004 261 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 CASQ1P31415 396 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 HPDP32754 393 aaPredicted RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 MAGEA4P43358 317 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 SSR4P51571 173 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 NR0B1P51843 470 aaKnown RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 TGM3Q08188 693 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 LAPTM5Q13571 262 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 ELAVL1Q15717 326 aaKnown RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 HIST2H2ACQ16777 129 aaPredicted RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 PAGE2BQ5JRK9 111 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 HIST2H2AA3Q6FI13 130 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 ZDHHC24Q6UX98 284 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 LRRC70Q7Z2Q7 622 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 TMEM132CQ8N3T6 1108 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 RNF175Q8N4F7 328 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 POGLUT1Q8NBL1 392 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 STAG3L4Q8TBR4 150 aa13.34□□□□□ -0.27
VMP1-206ENST00000587945 ZNF473Q8WTR7 871 aaKnown RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 PTPMT1Q8WUK0 201 aaPredicted RBP13.34□□□□□ -0.27
VMP1-206ENST00000587945 KCNC2Q96PR1 638 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms