RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 UBXN10Q96LJ8 280 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 SERINC2Q96SA4 455 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 COPS7BQ9H9Q2 264 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-205ENST00000587774 CD274Q9NZQ7 290 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 ZNF490Q9ULM2 529 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-205ENST00000587774 DAPP1Q9UN19 280 aa17.51■□□□□ 0.39
TRIM47-205ENST00000587774 PPIEQ9UNP9 301 aaKnown RBP17.51■□□□□ 0.39
TRIM47-205ENST00000587774 MRPS33Q9Y291 106 aaKnown RBP17.51■□□□□ 0.39
TRIM47-205ENST00000587774 CLDN4O14493 209 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 ITGA10O75578 1167 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 ABOP16442 354 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 HPDP32754 393 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-205ENST00000587774 MEOX1P50221 254 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 GPR143P51810 404 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 MTTPP55157 894 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 LIM2P55344 173 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 NAA30Q147X3 362 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-205ENST00000587774 ZNF630Q2M218 657 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-205ENST00000587774 KBTBD12Q3ZCT8 623 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 ABHD17CQ6PCB6 329 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 XKRXQ6PP77 449 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 C3orf62Q6ZUJ4 267 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 NCCRP1Q6ZVX7 275 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-205ENST00000587774 CTAGE3PQ8IX95 158 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 ZNF595Q8IYB9 648 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 KIAA1191Q96A73 305 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 EFCAB11Q9BUY7 163 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 ADAP2Q9NPF8 381 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 PTBP2Q9UKA9 531 aaKnown RBP17.5■□□□□ 0.39
TRIM47-205ENST00000587774 FBXW2Q9UKT8 454 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 RNF112Q9ULX5 631 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 KLF13Q9Y2Y9 288 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-205ENST00000587774 MEMO1Q9Y316 297 aa17.5■□□□□ 0.39
TRIM47-205ENST00000587774 CYR61O00622 381 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 PRKNO60260 465 aaPredicted RBP17.49■□□□□ 0.39
TRIM47-205ENST00000587774 CCNT2O60583 730 aaKnown RBP17.49■□□□□ 0.39
TRIM47-205ENST00000587774 FAM155BO75949 473 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 TFEBP19484 476 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 PTGER1P34995 402 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 RFC3P40938 356 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 SLMAPQ14BN4 828 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 CDSNQ15517 529 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 CYS1Q717R9 158 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 FGD2Q7Z6J4 655 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 CMC1Q7Z7K0 106 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 SULF2Q8IWU5 870 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 TMEM156Q8N614 296 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 AGAP11Q8TF27 550 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 ANP32BQ92688 251 aaKnown RBP17.49■□□□□ 0.39
TRIM47-205ENST00000587774 F2RL3Q96RI0 385 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 ALG9Q9H6U8 611 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 PRDM7Q9NQW5 492 aa17.49■□□□□ 0.39
TRIM47-205ENST00000587774 TFECO14948 347 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-205ENST00000587774 S100BP04271 92 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-205ENST00000587774 GSTA2P09210 222 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 SLC35E2BP0CK96 405 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 KCNC1P48547 511 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 IRF8Q02556 426 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 DLG1Q12959 904 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 CHIT1Q13231 466 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 EFTUD2Q15029 972 aaKnown RBP eCLIP17.48■□□□□ 0.391e-6■■□□□ 13.7
TRIM47-205ENST00000587774 ELAVL1Q15717 326 aaKnown RBP17.48■□□□□ 0.39
TRIM47-205ENST00000587774 PAGE2BQ5JRK9 111 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 ZNF793Q6ZN11 406 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 C16orf47Q6ZP98 133 aaPredicted RBP17.48■□□□□ 0.39
TRIM47-205ENST00000587774 LRRC70Q7Z2Q7 622 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 MDGA2Q7Z553 956 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 CCDC25Q86WR0 208 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 PPM1NQ8N819 430 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 POGLUT1Q8NBL1 392 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 FBXO25Q8TCJ0 367 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 KCNC2Q96PR1 638 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 PHF12Q96QT6 1004 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 CCDC77Q9BR77 488 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 MS4A8Q9BY19 250 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 CD244Q9BZW8 370 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 PHACTR1Q9C0D0 580 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 CHST11Q9NPF2 352 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 NUDT4Q9NZJ9 180 aa17.48■□□□□ 0.39
TRIM47-205ENST00000587774 MYOCOSA0A1B0GUC4 107 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 TMEM200CA6NKL6 621 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 SNRPB2P08579 225 aaKnown RBP17.47■□□□□ 0.39
TRIM47-205ENST00000587774 AGAP20933 346 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 SPRP35270 261 aaPredicted RBP17.47■□□□□ 0.39
TRIM47-205ENST00000587774 MSH2P43246 934 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 SMSP52788 366 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 PLTPP55058 493 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 GPR85P60893 370 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 LAPTM5Q13571 262 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 E2F2Q14209 437 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 TBCCQ15814 346 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 GRTP1Q5TC63 336 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 C3P1Q6ZMU1 363 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 RAPH1Q70E73 1250 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 DOLPP1Q86YN1 238 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 RUBCNLQ9H714 662 aa17.47■□□□□ 0.39
TRIM47-205ENST00000587774 LIN28AQ9H9Z2 209 aaKnown RBP17.47■□□□□ 0.39
TRIM47-205ENST00000587774 SYNDIG1LA6NDD5 238 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 SUPT3HB4E1H0 165 aa17.46■□□□□ 0.39
TRIM47-205ENST00000587774 KLRC4-KLRK1H3BQV0 150 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms