RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NECAB3Q96P71 396 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-204ENST00000587339 SLC35A5Q9BS91 424 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 EHD3Q9NZN3 535 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 ASB4Q9Y574 426 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 V9GYQ6 96 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 LOC105369274A0A096LPK9 316 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 LOC102723532A0A0G2JNH3 316 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 LILRA5A6NI73 299 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 KCNK5O95279 499 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 MANFP55145 182 aaKnown RBP18.84■□□□□ 0.61
TRIM47-204ENST00000587339 SIM2Q14190 667 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-204ENST00000587339 RGNQ15493 299 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 OGFOD3Q6PK18 319 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 RNF44Q7L0R7 432 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 OR4N4Q8N0Y3 316 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 OR52E4Q8NGH9 312 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 UTP15Q8TED0 518 aaKnown RBP18.84■□□□□ 0.61
TRIM47-204ENST00000587339 SEPHS2Q99611 448 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 SEMA6CQ9H3T2 930 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 ERVMER34-1Q9H9K5 563 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 TAS2R7Q9NYW3 318 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 FBXW2Q9UKT8 454 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 ATG4BQ9Y4P1 393 aa18.84■□□□□ 0.61
TRIM47-204ENST00000587339 H0YGG7 62 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 P2RX6O15547 441 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 PEX1O43933 1283 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 TPST1O60507 370 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 CREG1O75629 220 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 GNSP15586 552 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 CDH3P22223 829 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 CAPZBP47756 277 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 ARF3P61204 181 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-204ENST00000587339 SUZ12Q15022 739 aaKnown RBP18.83■□□□□ 0.6
TRIM47-204ENST00000587339 C14orf28Q4W4Y0 310 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 CPZQ66K79 652 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 ERICH5Q6P6B1 374 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 DGLUCYQ7Z3D6 616 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 ZNF655Q8N720 491 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-204ENST00000587339 OR5P2Q8WZ92 322 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 SEMA6AQ9H2E6 1030 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 SLAMF7Q9NQ25 335 aa18.83■□□□□ 0.6
TRIM47-204ENST00000587339 NUP214P35658 2090 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-204ENST00000587339 A0A1B0GTW7 788 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 A0A1W2PR48 441 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 EIF2S1P05198 315 aaKnown RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 PROS1P07225 676 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 RETP07949 1114 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 TDGF1P13385 188 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 ST6GAL1P15907 406 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 SOAT1P35610 550 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 PCBP4P57723 403 aaKnown RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 SRSF5Q13243 272 aaKnown RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 VMACQ2NL98 169 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 PMS2CLQ68D20 193 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 IRGCQ6NXR0 463 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 ERMP1Q7Z2K6 904 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 PAPD5Q8NDF8 572 aaKnown RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 ADCY4Q8NFM4 1077 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 ZCCHC10Q8TBK6 192 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 UCN3Q969E3 161 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 ZBED6CLQ96FA7 236 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 ROGDIQ9GZN7 287 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 NEUROD4Q9HD90 331 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 UTS2RQ9UKP6 389 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 SNX11Q9Y5W9 270 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 THADAQ6YHU6 1953 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 GLOD5A6NK44 160 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 ZSCAN9O15535 394 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 SH3BP5O60239 455 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 FASP25445 335 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 CHI3L1P36222 383 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 FRKP42685 505 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 PPM1FP49593 454 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 ABHD13Q7L211 337 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 AMIGO2Q86SJ2 522 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 ZZZ3Q8IYH5 903 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 CATSPER1Q8NEC5 780 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 OR5AK3PQ8NH89 298 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 NETO1Q8TDF5 533 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 RNF145Q96MT1 663 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 DPH2Q9BQC3 489 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 SPATA9Q9BWV2 254 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 IL21RQ9HBE5 538 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 LYARQ9NX58 379 aaKnown RBP18.82■□□□□ 0.6
TRIM47-204ENST00000587339 SNX8Q9Y5X2 465 aa18.82■□□□□ 0.6
TRIM47-204ENST00000587339 PRKRAO75569 313 aaKnown RBP18.81■□□□□ 0.6
TRIM47-204ENST00000587339 FCGR1AP12314 374 aa18.81■□□□□ 0.6
TRIM47-204ENST00000587339 CRATP43155 626 aa18.81■□□□□ 0.6
TRIM47-204ENST00000587339 CTSKP43235 329 aa18.81■□□□□ 0.6
TRIM47-204ENST00000587339 CSTF1Q05048 431 aaKnown RBP18.81■□□□□ 0.6
TRIM47-204ENST00000587339 ADRM1Q16186 407 aa18.81■□□□□ 0.6
TRIM47-204ENST00000587339 DEFB134Q4QY38 66 aa18.81■□□□□ 0.6
TRIM47-204ENST00000587339 FAM98BQ52LJ0 330 aaKnown RBP18.81■□□□□ 0.6
TRIM47-204ENST00000587339 HMBOX1Q6NT76 420 aa18.81■□□□□ 0.6
TRIM47-204ENST00000587339 C11orf74Q86VG3 221 aa18.81■□□□□ 0.6
TRIM47-204ENST00000587339 PTOV1Q86YD1 416 aa18.81■□□□□ 0.6
TRIM47-204ENST00000587339 C19orf47Q8N9M1 422 aaKnown RBP18.81■□□□□ 0.6
TRIM47-204ENST00000587339 FBXO30Q8TB52 745 aa18.81■□□□□ 0.6
TRIM47-204ENST00000587339 EME1Q96AY2 570 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms