RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 C1orf61Q13536 156 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 NUMA1Q14980 2115 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 SHBQ15464 509 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 CDKN3Q16667 212 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 TEX44Q53QW1 395 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 ZNF569Q5MCW4 686 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 HES3Q5TGS1 186 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 PNCKQ6P2M8 343 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 MTFR2Q6P444 385 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 DOK6Q6PKX4 331 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 USP43Q70EL4 1123 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 RAB11FIP2Q7L804 512 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 SLC29A4Q7RTT9 530 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 PID1Q7Z2X4 250 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 EFL1Q7Z2Z2 1120 aaKnown RBP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 GLT6D1Q7Z4J2 308 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 HSD11B1LQ7Z5J1 315 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 TSPAN33Q86UF1 283 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 CTAGE6Q86UF2 777 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 TMEM200AQ86VY9 491 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 CTAGE4Q8IX94 777 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 KRT222Q8N1A0 295 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 SLC25A45Q8N413 288 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 RNF10Q8N5U6 811 aaKnown RBP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 POGLUT1Q8NBL1 392 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 FAM46DQ8NEK8 389 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 Q8NFD4 153 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 SUN5Q8TC36 379 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 IFI44Q8TCB0 444 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 RFKQ969G6 155 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 TSACCQ96A04 125 aaPredicted RBP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 LRRC46Q96FV0 321 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 IMP4Q96G21 291 aaKnown RBP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 PDXPQ96GD0 296 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 TTC25Q96NG3 672 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 QKIQ96PU8 341 aaKnown RBP eCLIP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 TRAPPC9Q96Q05 1148 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 TBCDQ9BTW9 1192 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 ZSCAN5AQ9BUG6 496 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 SLC25A51Q9H1U9 297 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 TRABDQ9H4I3 376 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 HOMER3Q9NSC5 361 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 DDX18Q9NVP1 670 aaKnown RBP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 NMRK1Q9NWW6 199 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 EHD3Q9NZN3 535 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 HACD3Q9P035 362 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 MARCH4Q9P2E8 410 aaPredicted RBP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 IL19Q9UHD0 177 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 FAM153AQ9UHL3 310 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 GRID1Q9ULK0 1009 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 GUCA1BQ9UMX6 200 aa4.53□□□□□ -1.68
ZNF540-204ENST00000586792 AAR2Q9Y312 384 aaKnown RBP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 NOSIPQ9Y314 301 aaKnown RBP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.53□□□□□ -1.68
ZNF540-204ENST00000586792 PTPRZ1P23471 2315 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 RIF1Q5UIP0 2472 aaKnown RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TRPM6Q9BX84 2022 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 FAM149AA5PLN7 773 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TMEM202A6NGA9 273 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 GOLGA6L10A6NI86 522 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 E7ENX8 843 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 E7EVH7 732 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 INPP4BO15327 924 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ADAM20O43506 726 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 GUCY1B2O75343 617 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 DNAJB5O75953 348 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 CLDN7O95471 211 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 NDST3O95803 873 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 MT-CYBP00156 380 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 IFNB1P01574 187 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 MT-ND5P03915 603 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 FGF1P05230 155 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PROS1P07225 676 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 HOXC4P09017 264 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 SLC2A4P14672 509 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 VCLP18206 1134 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PTPN3P26045 913 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TEAD1P28347 426 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 RBL1P28749 1068 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PPARGP37231 505 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 SPINT3P49223 89 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ETV1P50549 477 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PSMD7P51665 324 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 STC1P52823 247 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 GEMP55040 296 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 RPS16P62249 146 aaKnown RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 NKX6-1P78426 367 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 KCNJ10P78508 379 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PDE1BQ01064 536 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TAP2Q03519 686 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 NIPAL4Q0D2K0 466 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 MALLQ13021 153 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 BMPR2Q13873 1038 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 RCN2Q14257 317 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 DAZAP2Q15038 168 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 RPS6KA1Q15418 735 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 NTRK2Q16620 822 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TAZQ16635 292 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms