RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 A0A0A6YYD5 115 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 IGKV1-8A0A0C4DH67 115 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 LRIT2A6NDA9 550 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 TRIM64A6NGJ6 449 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 TRIM64CA6NLI5 447 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ISM1B1AKI9 464 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 C10orf142B7Z368 130 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 MBTPS2O43462 519 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 LCMT2O60294 686 aaKnown RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 RASGRP1O95267 797 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 PGM3O95394 542 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 SERPIND1P05546 499 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 TFAP2AP05549 437 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 CHRM5P08912 532 aaPredicted RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 F3P13726 295 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ITGA2P17301 1181 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 BCL6P41182 706 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ACTR1BP42025 376 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ALDH9A1P49189 494 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 DGKEP52429 567 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 MVDP53602 400 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 MANFP55145 182 aaKnown RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 TPD52P55327 224 aaPredicted RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 ITGA1P56199 1179 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 DSTNP60981 165 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 SRP54P61011 504 aaKnown RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 ACTR1AP61163 376 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 RPS15AP62244 130 aaKnown RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 CDK6Q00534 326 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 TCF15Q12870 199 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ILF3Q12906 894 aaKnown RBP eCLIP10.72□□□□□ -0.69
LIG3-204ENST00000585740 TOP3AQ13472 1001 aaPredicted RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 KIAA0895LQ68EN5 471 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ZNF425Q6IV72 752 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ZC3H7AQ8IWR0 971 aaKnown RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 ADGRF3Q8IZF5 1079 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ZNF786Q8N393 782 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 EDAQ92838 391 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 DGCR14Q96DF8 476 aaKnown RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 NEURL3Q96EH8 262 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 THAP11Q96EK4 314 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 PDXPQ96GD0 296 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 KCNC2Q96PR1 638 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ZNF347Q96SE7 839 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 DPH2Q9BQC3 489 aaPredicted RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 DPH7Q9BTV6 452 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 PHF7Q9BWX1 381 aaPredicted RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 SORBS1Q9BX66 1292 aaKnown RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 YIPF3Q9GZM5 350 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ROGDIQ9GZN7 287 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 REEP1Q9H902 201 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 C1GALT1Q9NS00 363 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 FAM86C1Q9NVL1 165 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 SCHIP1Q9P0W5 487 aaPredicted RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 TBC1D29Q9UFV1 150 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 PADI2Q9Y2J8 665 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 ZNF451Q9Y4E5 1061 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 PCDHGB5Q9Y5G0 923 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 DGKBQ9Y6T7 804 aa10.72□□□□□ -0.69
LIG3-204ENST00000585740 SNRNP200O75643 2136 aaKnown RBP10.72□□□□□ -0.69
LIG3-204ENST00000585740 FAM221BA6H8Z2 402 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 OR5K4A6NMS3 321 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 RTCAO00442 366 aaKnown RBP10.71□□□□□ -0.69
LIG3-204ENST00000585740 HAT1O14929 419 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ZW10O43264 779 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 HS6ST1O60243 411 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 UGT2B11O75310 529 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 PDE9AO76083 593 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ITGAMP11215 1152 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 SRFP11831 508 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ETFAP13804 333 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ATP6V1B1P15313 513 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 PEBP1P30086 187 aaKnown RBP10.71□□□□□ -0.69
LIG3-204ENST00000585740 NTSP30990 170 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ALDH3B2P48448 385 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ANXA11P50995 505 aaKnown RBP10.71□□□□□ -0.69
LIG3-204ENST00000585740 PCBP4P57723 403 aaKnown RBP10.71□□□□□ -0.69
LIG3-204ENST00000585740 ESRRGP62508 458 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 SELENOWP63302 87 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 RGS1Q08116 209 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 SLC9A5Q14940 896 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 SMAD2Q15796 467 aaKnown RBP10.71□□□□□ -0.69
LIG3-204ENST00000585740 IFI44LQ53G44 452 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 CRB2Q5IJ48 1285 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 TOR1AIP1Q5JTV8 583 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 RBM48Q5RL73 367 aaKnown RBP10.71□□□□□ -0.69
LIG3-204ENST00000585740 FOXB2Q5VYV0 432 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 SAXO2Q658L1 398 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 BMP8AQ7Z5Y6 402 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 UBE3DQ7Z6J8 389 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 THAP5Q7Z6K1 395 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 ABI3BPQ7Z7G0 1075 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 PAQR7Q86WK9 346 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 RNF130Q86XS8 419 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 TRIM48Q8IWZ4 208 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 C8orf59Q8N0T1 100 aaPredicted RBP10.71□□□□□ -0.69
LIG3-204ENST00000585740 METTL25Q8N6Q8 603 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 TMEM145Q8NBT3 493 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 SETD9Q8NE22 299 aa10.71□□□□□ -0.69
LIG3-204ENST00000585740 OR2L5Q8NG80 312 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms