RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CCZ1BP86790 482 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 CCZ1P86791 482 aaPredicted RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 SLC13A2Q13183 592 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 BMPR2Q13873 1038 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 FRG1Q14331 258 aaKnown RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 ELAVL1Q15717 326 aaKnown RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 HYAL4Q2M3T9 481 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 ZNF750Q32MQ0 723 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 C18orf21Q32NC0 220 aaPredicted RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 RTL6Q6ICC9 239 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.42□□□□□ -0.26
SDF2-202ENST00000585428 NKAPQ8N5F7 415 aaKnown RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 MORN4Q8NDC4 146 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 ANKRD49Q8WVL7 239 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 ASB15Q8WXK1 588 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 SLCO2A1Q92959 643 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 RHBDF1Q96CC6 855 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 WDR83Q9BRX9 315 aaKnown RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 TMUB1Q9BVT8 246 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 TTTY12Q9BZ98 90 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 PITHD1Q9GZP4 211 aaPredicted RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 SLC24A3Q9HC58 644 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 PRDM7Q9NQW5 492 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 ZNF490Q9ULM2 529 aaPredicted RBP13.42□□□□□ -0.26
SDF2-202ENST00000585428 OARD1Q9Y530 152 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 TEX264Q9Y6I9 313 aa13.42□□□□□ -0.26
SDF2-202ENST00000585428 A0A0G2JMM0 328 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 A0A1W2PPB8 328 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 A0A1W2PRS3 328 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 FAM221AA4D161 298 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 SYNDIG1LA6NDD5 238 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 FAM166BA8MTA8 275 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 KIR3DP1A8MWS1 328 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 WWP2O00308 870 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 BCKDKO14874 412 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 B3GALT2O43825 422 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 SUSD5O60279 629 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 ZNF354AO60765 605 aaPredicted RBP13.41□□□□□ -0.26
SDF2-202ENST00000585428 PRAMEF4O60810 478 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 CLEC3AO75596 197 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 GLI4P10075 376 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 SAT1P21673 171 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 ACVR2AP27037 513 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 SOX3P41225 446 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 PLA2G16P53816 162 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 IST1P53990 364 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 LIM2P55344 173 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 DLX5P56178 289 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 FOXO1Q12778 655 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 PPP1R7Q15435 360 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 HP1BP3Q5SSJ5 553 aaPredicted RBP13.41□□□□□ -0.26
SDF2-202ENST00000585428 NDUFAF5Q5TEU4 345 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 PRAMEF9Q5VWM5 478 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 STEAP4Q687X5 459 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 ABHD17CQ6PCB6 329 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 HSDL2Q6YN16 418 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 TRILQ7L0X0 811 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 VN1R5Q7Z5H4 357 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 SLC22A16Q86VW1 577 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 ZC3HC1Q86WB0 502 aaKnown RBP13.41□□□□□ -0.26
SDF2-202ENST00000585428 LIX1LQ8IVB5 337 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 CLYBLQ8N0X4 340 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 OR2L5Q8NG80 312 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 OR5M9Q8NGP3 310 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 OR5M3Q8NGP4 307 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 OR8K3Q8NH51 312 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 POM121Q96HA1 1249 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 SCYL1Q96KG9 808 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 PWWP2AQ96N64 755 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 SERINC2Q96SA4 455 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 FAM173AQ9BQD7 235 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 ALOXE3Q9BYJ1 711 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 REXO4Q9GZR2 422 aaKnown RBP13.41□□□□□ -0.26
SDF2-202ENST00000585428 CXXC4Q9H2H0 198 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 IL1RL2Q9HB29 575 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 DAPP1Q9UN19 280 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 FAM215AQ9Y5M1 114 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 PSAT1Q9Y617 370 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 CLCA3PQ9Y6N3 262 aa13.41□□□□□ -0.26
SDF2-202ENST00000585428 A0A0G2JNJ9 132 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 NPEPPSL1A6NEC2 478 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 WDR47O94967 919 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 GGT5P36269 586 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 ZFP36L2P47974 494 aaKnown RBP13.4□□□□□ -0.26
SDF2-202ENST00000585428 HK2P52789 917 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 TAS2R39P59534 338 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 PLGLB1Q02325 96 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 SLBPQ14493 270 aaKnown RBP eCLIP13.4□□□□□ -0.26
SDF2-202ENST00000585428 SLC10A1Q14973 349 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 EFTUD2Q15029 972 aaKnown RBP eCLIP13.4□□□□□ -0.26
SDF2-202ENST00000585428 ZNF585AQ6P3V2 769 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 RTL4Q6ZR62 310 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 CLNKQ7Z7G1 428 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 KRT78Q8N1N4 520 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 TMEM251Q8N6I4 163 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 ZNF321PQ8N8H1 164 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 FAM47BQ8NA70 645 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 GOLM1Q8NBJ4 401 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 OR10Q1Q8NGQ4 319 aa13.4□□□□□ -0.26
SDF2-202ENST00000585428 NRGNQ92686 78 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms