RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 GASTP01350 101 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CTSLP07711 333 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CHMP24386 653 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PBLDP30039 288 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SOX6P35712 828 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DMC1Q14565 340 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MED22Q15528 200 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TIMM50Q3ZCQ8 353 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 FRMPD2BQ6IN97 320 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ZNF770Q6IQ21 691 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TMEM53Q6P2H8 277 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 UNC5DQ6UXZ4 953 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 AKAP14Q86UN6 197 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 AP2M1Q96CW1 435 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 HHIPL1Q96JK4 782 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 RC3H2Q9HBD1 1191 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 RAB23Q9ULC3 237 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CFL2Q9Y281 166 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DYRK1BQ9Y463 629 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PCDHGB6Q9Y5F9 930 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PNMA8CA0A1B0GUJ8 204 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 A0A1W2PRB8 838 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TYRP14679 529 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SPNP16150 400 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ALOX12P18054 663 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LAG3P18627 525 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CA8P35219 290 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CRISP1P54107 249 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KRR1Q13601 381 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 IER5LQ5T953 404 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PLAG1Q6DJT9 500 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SLC44A2Q8IWA5 706 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 NLGN4XQ8N0W4 816 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 IRF7Q92985 503 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CORO1BQ9BR76 489 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KCND3Q9UK17 655 aa13.56□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCRL2O00421 344 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TPPPO94811 219 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DNTTP04053 509 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 IFNW1P05000 195 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KLK1P06870 262 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CNR2P34972 360 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PIK3CBP42338 1070 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SLC15A1P46059 708 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TSTA3Q13630 321 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TSTQ16762 297 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DUSP7Q16829 419 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SPANXN2Q5MJ10 180 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 HIST2H2AA3Q6FI13 130 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DESI1Q6ICB0 168 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LIPIQ6XZB0 460 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PTCHD4Q6ZW05 846 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCDC190Q86UF4 302 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SLC30A8Q8IWU4 369 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TAPBPLQ9BX59 468 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ROGDIQ9GZN7 287 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 EPHX3Q9H6B9 360 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 NMNAT1Q9HAN9 279 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CLN6Q9NWW5 311 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DSPPQ9NZW4 1301 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 EIF2S1P05198 315 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 C8AP07357 584 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GSTT2P0CG29 244 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GSTT2BP0CG30 244 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PIPP12273 146 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 XPAP23025 273 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SOAT1P35610 550 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MMP12P39900 470 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCR2P41597 374 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TAP2Q03519 686 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PUM1Q14671 1186 aaKnown RBP eCLIP13.55□□□□□ -0.244e-7■□□□□ 11.1
CDK5RAP3-237ENST00000585163 STARD3Q14849 445 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ZNF805Q5CZA5 627 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LRRC56Q8IYG6 542 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LMNTD1Q8N9Z9 388 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CYB5D2Q8WUJ1 264 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SORCS1Q8WY21 1168 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MRGPRX3Q96LB0 322 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SLC6A16Q9GZN6 736 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MIR1-1HGQ9H1L0 117 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SPNS1Q9H2V7 528 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 RHCGQ9UBD6 479 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 IL36AQ9UHA7 158 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 POU2F3Q9UKI9 436 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 OGDHLQ9ULD0 1010 aa13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CAB39Q9Y376 341 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-237ENST00000585163 FFAR1O14842 300 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KMOO15229 486 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ELFN1P0C7U0 828 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ATN1P54259 1190 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DSTNP60981 165 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MEF2AQ02078 507 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DOC2BQ14184 412 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SSX1Q16384 188 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CARTPTQ16568 116 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 REEP3Q6NUK4 255 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CNKSR3Q6P9H4 555 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms