RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	TMEM52	Q8NDY8	209 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	CATSPER1	Q8NEC5	780 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	HAS2	Q92819	552 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	MARVELD3	Q96A59	401 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	KCNC2	Q96PR1	638 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	CSF3R	Q99062	836 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	NPAS2	Q99743	824 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	ACTR8	Q9H981	624 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	COPS7B	Q9H9Q2	264 aa	Predicted RBP	12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	DMRT3	Q9NQL9	472 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	PLA2G3	Q9NZ20	509 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	FETUB	Q9UGM5	382 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	TMCO1	Q9UM00	188 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	DAPP1	Q9UN19	280 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	ANGPTL3	Q9Y5C1	460 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	TNPO3	Q9Y5L0	923 aa	Known RBP	12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	ANKRD17	O75179	2603 aa	Known RBP	12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	CRYBG3	Q68DQ2	2970 aa		12.47	□□□□□ -0.41
SREBF1-223	ENST00000584760	SVIL	O95425	2214 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	SAGE2P	A6NJ88	616 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760		H0YIV9	168 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	CYR61	O00622	381 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	OR7A17	O14581	309 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	WDPCP	O95876	746 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	UQCRH	P07919	91 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	SBK3	P0C264	359 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	EEF1D	P29692	281 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	PIK3CB	P42338	1070 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	LIM2	P55344	173 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	HSD17B7	P56937	341 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	ZNF33B	Q06732	778 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	ACTN3	Q08043	901 aa	Predicted RBP	12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	SLC29A2	Q14542	456 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	ABHD17B	Q5VST6	288 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	FCRLB	Q6BAA4	426 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	MYLK4	Q86YV6	388 aa	Predicted RBP	12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	CRLF3	Q8IUI8	442 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	RNF175	Q8N4F7	328 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	TMEM151A	Q8N4L1	468 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	L3MBTL4	Q8NA19	623 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	FAM47B	Q8NA70	645 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	SRFBP1	Q8NEF9	429 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	NFAM1	Q8NET5	270 aa	Predicted RBP	12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	HUS1B	Q8NHY5	278 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	ELP5	Q8TE02	316 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	MTBP	Q96DY7	904 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	PHF21B	Q96EK2	531 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	CMTM7	Q96FZ5	175 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	SCYL1	Q96KG9	808 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	MRPL57	Q9BQC6	102 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	MRPL46	Q9H2W6	279 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	IPPK	Q9H8X2	491 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	KCNK13	Q9HB14	408 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	LYRM4	Q9HD34	91 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	KCMF1	Q9P0J7	381 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	TEKT2	Q9UIF3	430 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	PCTP	Q9UKL6	214 aa		12.46	□□□□□ -0.41
SREBF1-223	ENST00000584760	TRAV17	A0A0B4J275	112 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	OR5H15	A6NDH6	313 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760		A8MUI8	341 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	RTCA	O00442	366 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	LRRTM2	O43300	516 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	HNRNPR	O43390	633 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	MAN1A2	O60476	641 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	SMIM24	O75264	130 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	F10	P00742	488 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	TGFB1	P01137	390 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	RPS17	P08708	135 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	HIST1H1T	P22492	207 aa	Predicted RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	ATP5A1	P25705	553 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	RIPPLY3	P57055	190 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	TRAF3	Q13114	568 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	DDX39B	Q13838	428 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	TERF2	Q15554	542 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	ACER2	Q5QJU3	275 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	TEX35	Q5T0J7	233 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	LGSN	Q5TDP6	509 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	KHDRBS2	Q5VWX1	349 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	SP5	Q6BEB4	398 aa	Predicted RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	RPUSD3	Q6P087	351 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	ZGRF1	Q86YA3	2104 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	ZNF595	Q8IYB9	648 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	CYP4X1	Q8N118	509 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	LGI4	Q8N135	537 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	BEST3	Q8N1M1	668 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	KIF2B	Q8N4N8	673 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	ACOT4	Q8N9L9	421 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	ARMC2	Q8NEN0	867 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	OR52B6	Q8NGF0	335 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	WDR20	Q8TBZ3	569 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	MZB1	Q8WU39	189 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	NSUN5	Q96P11	429 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	MTERF1	Q99551	399 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	TBCD	Q9BTW9	1192 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	ZNF717	Q9BY31	904 aa	Predicted RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	ROGDI	Q9GZN7	287 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	OR51B5	Q9H339	312 aa		12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	NOL11	Q9H8H0	719 aa	Known RBP	12.45	□□□□□ -0.42
SREBF1-223	ENST00000584760	ZBTB26	Q9HCK0	441 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms