RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ACTR1BP42025 376 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 CXCL12P48061 93 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 ALDH9A1P49189 494 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 ACTR1AP61163 376 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 ZIC1Q15915 447 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 RD3Q7Z3Z2 195 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 ADGRF3Q8IZF5 1079 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 TOE1Q96GM8 510 aaKnown RBP21.56■■□□□ 1.04
CCDC47-204ENST00000582252 DPH7Q9BTV6 452 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 GABARAPL1Q9H0R8 117 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 SLC6A20Q9NP91 592 aa21.56■■□□□ 1.04
CCDC47-204ENST00000582252 TRNAU1APQ9NX07 287 aaKnown RBP21.56■■□□□ 1.04
CCDC47-204ENST00000582252 WSB2Q9NYS7 404 aaPredicted RBP21.56■■□□□ 1.04
CCDC47-204ENST00000582252 GON4LQ3T8J9 2241 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 A0A087WXM4 84 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 LRIT2A6NDA9 550 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 ISM1B1AKI9 464 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 DPM1O60762 260 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 NUDT7P0C024 238 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 ETFAP13804 333 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 MVDP53602 400 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 MANFP55145 182 aaKnown RBP21.55■■□□□ 1.04
CCDC47-204ENST00000582252 SRP54P61011 504 aaKnown RBP21.55■■□□□ 1.04
CCDC47-204ENST00000582252 SCARB2Q14108 478 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 SATL1Q86VE3 508 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 TMEM145Q8NBT3 493 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 LZICQ8WZA0 190 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 TSACCQ96A04 125 aaPredicted RBP21.55■■□□□ 1.04
CCDC47-204ENST00000582252 NRBF2Q96F24 287 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 ZBED6CLQ96FA7 236 aaPredicted RBP21.55■■□□□ 1.04
CCDC47-204ENST00000582252 TSC22D3Q99576 134 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 CEP192Q8TEP8 1941 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 MUC3AQ02505 3323 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 EML5Q05BV3 1969 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 C10orf142B7Z368 130 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 H0Y8X5 98 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 SCAMP1O15126 338 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 RASGRP1O95267 797 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 DNAJA1P31689 397 aaKnown RBP21.55■■□□□ 1.04
CCDC47-204ENST00000582252 BCL6P41182 706 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 RABIFP47224 123 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 CCR5P51681 352 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 MAMSTRQ6ZN01 415 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 CCDC80Q76M96 950 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 PLD3Q8IV08 490 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 ARL10Q8N8L6 244 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 TPD52L3Q96J77 140 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 DOHHQ9BU89 302 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 TPSD1Q9BZJ3 242 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 GRIP2Q9C0E4 1043 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 LHX9Q9NQ69 397 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 EHD3Q9NZN3 535 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 ANGPT4Q9Y264 503 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 CA5BQ9Y2D0 317 aa21.55■■□□□ 1.04
CCDC47-204ENST00000582252 A0A0A6YYD5 115 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 MYOCOSA0A1B0GUC4 107 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 PRAMEF26H0Y7S4 382 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 HAT1O14929 419 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 CHRM5P08912 532 aaPredicted RBP21.54■■□□□ 1.04
CCDC47-204ENST00000582252 NELFEP18615 380 aaKnown RBP21.54■■□□□ 1.04
CCDC47-204ENST00000582252 FPR1P21462 350 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 AK4P27144 223 aaPredicted RBP21.54■■□□□ 1.04
CCDC47-204ENST00000582252 FRKP42685 505 aaPredicted RBP21.54■■□□□ 1.04
CCDC47-204ENST00000582252 TSFMP43897 325 aaKnown RBP21.54■■□□□ 1.04
CCDC47-204ENST00000582252 IST1P53990 364 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 ITGA1P56199 1179 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 TGM3Q08188 693 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 C16orf72Q14CZ0 275 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 SLC5A12Q1EHB4 618 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 ZIK1Q3SY52 487 aaPredicted RBP21.54■■□□□ 1.04
CCDC47-204ENST00000582252 COX20Q5RI15 118 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 CWF19L1Q69YN2 538 aaKnown RBP21.54■■□□□ 1.04
CCDC47-204ENST00000582252 MFSD9Q8NBP5 474 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 KCNC2Q96PR1 638 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 TOR3AQ9H497 397 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 C1GALT1Q9NS00 363 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 ACSS1Q9NUB1 689 aaPredicted RBP21.54■■□□□ 1.04
CCDC47-204ENST00000582252 GPATCH2Q9NW75 528 aa21.54■■□□□ 1.04
CCDC47-204ENST00000582252 IGHV1OR15-9A0A0B4J2B8 117 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 HS6ST1O60243 411 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 SEC24DO94855 1032 aaPredicted RBP21.53■■□□□ 1.04
CCDC47-204ENST00000582252 F3P13726 295 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 PEBP1P30086 187 aaKnown RBP21.53■■□□□ 1.04
CCDC47-204ENST00000582252 PLA2G16P53816 162 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 TPD52P55327 224 aaPredicted RBP21.53■■□□□ 1.04
CCDC47-204ENST00000582252 STXBP1P61764 594 aaKnown RBP21.53■■□□□ 1.04
CCDC47-204ENST00000582252 SELENOWP63302 87 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 SLC9A5Q14940 896 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 MLC1Q15049 377 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 ADPRMQ3LIE5 342 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 KIAA0895LQ68EN5 471 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 UBE3DQ7Z6J8 389 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 VTCN1Q7Z7D3 282 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 RNF130Q86XS8 419 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 OR10Q1Q8NGQ4 319 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 MAL2Q969L2 176 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 C17orf62Q9BQA9 187 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 SRMSQ9H3Y6 488 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 REEP1Q9H902 201 aa21.53■■□□□ 1.04
CCDC47-204ENST00000582252 SMURF2Q9HAU4 748 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms