RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PEX5LQ8IYB4 626 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 FBXW8Q8N3Y1 598 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 ARL10Q8N8L6 244 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 C11orf45Q8TAV5 145 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 GANCQ8TET4 914 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 UBTD2Q8WUN7 234 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 POM121L2Q96KW2 1035 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 NSMCE3Q96MG7 304 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 GUCD1Q96NT3 240 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 GAL3ST4Q96RP7 486 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 ERGIC2Q96RQ1 377 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 ATP6V0BQ99437 205 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 OPRPNQ99935 248 aaPredicted RBP3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 NTMT1Q9BV86 223 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 WWTR1Q9GZV5 400 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 TSPYL1Q9H0U9 437 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 UPF3AQ9H1J1 476 aaKnown RBP3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 TEX10Q9NXF1 929 aaPredicted RBP3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 CYP39A1Q9NYL5 469 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 PLEK2Q9NYT0 353 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 ASIC3Q9UHC3 531 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 EXOC7Q9UPT5 735 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 KCNK6Q9Y257 313 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 FOXA2Q9Y261 457 aaPredicted RBP3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 WIPI2Q9Y4P8 454 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 OR1A2Q9Y585 309 aa3.95□□□□□ -1.78
SMCHD1-205ENST00000581383 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 A0A0U1RQG5 324 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 ATP6AP2A0A1C7CYW4 349 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 MEX3AA1L020 520 aaKnown RBP3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 ANHXE9PGG2 379 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 G3V2L1 256 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 EPOP01588 193 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 LYNP07948 512 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 THEGLP0DJG4 465 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 KRT5P13647 590 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 AOC1P19801 751 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 KCNK10P57789 538 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 YBEYP58557 167 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 ZNF177Q13360 481 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 GK2Q14410 553 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 FCN2Q15485 313 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 STX1AQ16623 288 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 MOGAT2Q3SYC2 334 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 ZC2HC1BQ5TFG8 222 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 PLBD1Q6P4A8 553 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 CD164L2Q6UWJ8 174 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 LCLAT1Q6UWP7 414 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 CYP4V2Q6ZWL3 525 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 STHQ8IWL8 128 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 NEK11Q8NG66 645 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 OR52B6Q8NGF0 335 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 LINC00479Q96M42 142 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 ZNF560Q96MR9 790 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 SPATA13Q96N96 652 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 PRAM1Q96QH2 718 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 SYT11Q9BT88 431 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 FGFBP2Q9BYJ0 223 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 TRIM7Q9C029 511 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 THAP9Q9H5L6 903 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 UBE2TQ9NPD8 197 aaPredicted RBP3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 ZDHHC18Q9NUE0 388 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 ERVK-19Q9WJR5 959 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 ZHX2Q9Y6X8 837 aa3.94□□□□□ -1.78
SMCHD1-205ENST00000581383 LOC105371242A0A075B767 164 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 IQCMA0A1B0GVH7 501 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 SYCE3A1L190 88 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 A8MU76 341 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 K7EQD1 137 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 RNF103O00237 685 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 CPNE6O95741 557 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 FGF19O95750 216 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 ANGPTL1O95841 491 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 ANPEPP15144 967 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 SELEP16581 610 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 EDNRAP25101 427 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 NT5C2P49902 561 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 TNFSF10P50591 281 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 TMEM50BP56557 158 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 GABPAQ06546 454 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 FASTKD3Q14CZ7 662 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 LRRTM1Q86UE6 522 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 CACUL1Q86Y37 369 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 METTL4Q8N3J2 472 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 SIDT2Q8NBJ9 832 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 AQP11Q8NBQ7 271 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 CCDC197Q8NCU1 140 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 OR10G7Q8NGN6 311 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 OR4A16Q8NH70 328 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 CXorf58Q96LI9 332 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 AGAP4Q96P64 663 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 SSX3Q99909 188 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 KCNK13Q9HB14 408 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 S100A14Q9HCY8 104 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 IL1RAPQ9NPH3 570 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 FETUBQ9UGM5 382 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 APPL1Q9UKG1 709 aa3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 TDRKHQ9Y2W6 561 aaKnown RBP3.93□□□□□ -1.78
SMCHD1-205ENST00000581383 MRPS18CQ9Y3D5 142 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms