RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 STX1BP61266 288 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 SHC2P98077 582 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 SLC9B1Q4ZJI4 515 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 VWA5B1Q5TIE3 1220 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 IL23RQ5VWK5 629 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 IKBIPQ70UQ0 350 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 SPATA21Q7Z572 469 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 PDSS2Q86YH6 399 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 TMEM132CQ8N3T6 1108 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 KIAA1143Q96AT1 154 aaPredicted RBP13.51□□□□□ -0.25
SKA2-205ENST00000580541 TBC1D20Q96BZ9 403 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 C11orf24Q96F05 449 aaPredicted RBP13.51□□□□□ -0.25
SKA2-205ENST00000580541 ELAC2Q9BQ52 826 aaKnown RBP13.51□□□□□ -0.25
SKA2-205ENST00000580541 GPR87Q9BY21 358 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 TGIF2Q9GZN2 237 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 FAM107BQ9H098 131 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 RABEP2Q9H5N1 569 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 ASCL3Q9NQ33 180 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 C14orf105Q9NVL8 296 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 ASIC5Q9NY37 505 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 FOXJ2Q9P0K8 574 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 KCND3Q9UK17 655 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 ANGPTL2Q9UKU9 493 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 WASF3Q9UPY6 502 aa13.51□□□□□ -0.25
SKA2-205ENST00000580541 SPTBN2O15020 2390 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 C1orf226A1L170 272 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 C21orf140B9A014 251 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 RAD1O60671 282 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 EEDO75530 441 aaKnown RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 FAM107AO95990 144 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 CYC1P08574 325 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 RAB40ALP0C0E4 278 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 DRD4P21917 467 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 PPP2R1BP30154 601 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 RUNX2Q13950 521 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 LSM12Q3MHD2 195 aaKnown RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 TBC1D25Q3MII6 688 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 MLIPQ5VWP3 458 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 MRM1Q6IN84 353 aaKnown RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 ZNF517Q6ZMY9 492 aaPredicted RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 ZNF793Q6ZN11 406 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 MED25Q71SY5 747 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 R3HCC1LQ7Z5L2 792 aaKnown RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 ZNF595Q8IYB9 648 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 SAMD14Q8IZD0 417 aaPredicted RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 CACNA2D3Q8IZS8 1091 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 CA13Q8N1Q1 262 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 METTL27Q8N6F8 245 aaPredicted RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 IL22RA1Q8N6P7 574 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 EFCAB3Q8N7B9 438 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 RFWD2Q8NHY2 731 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 C16orf78Q8WTQ4 265 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 TANKQ92844 425 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 FGF11Q92914 225 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 MIEF2Q96C03 454 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 THOC1Q96FV9 657 aaKnown RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 VPS50Q96JG6 964 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 FCRL1Q96LA6 429 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 CCT8L2Q96SF2 557 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 TMEM120AQ9BXJ8 343 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 ZNF717Q9BY31 904 aaPredicted RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 SLC26A1Q9H2B4 701 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 WDR54Q9H977 334 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 FBXW2Q9UKT8 454 aa13.5□□□□□ -0.25
SKA2-205ENST00000580541 POLR3HQ9Y535 204 aaPredicted RBP13.5□□□□□ -0.25
SKA2-205ENST00000580541 SPEGQ15772 3267 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 IGLV3-12A0A075B6K2 115 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 PMS2P1A4D2B8 440 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 ZNF860A6NHJ4 632 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 PCDH17O14917 1159 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 PROM1O43490 865 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 PRMT3O60678 531 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 MED26O95402 600 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 GBAP04062 536 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 FHP07954 510 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 LIPCP11150 499 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 BCKDHAP12694 445 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 TCN2P20062 427 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 PRPS1L1P21108 318 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 XCR1P46094 333 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 TAS2R50P59544 299 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 RAE1P78406 368 aaKnown RBP13.49□□□□□ -0.25
SKA2-205ENST00000580541 C2orf80Q0P641 193 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 GKAP1Q5VSY0 366 aaPredicted RBP13.49□□□□□ -0.25
SKA2-205ENST00000580541 ZNF385CQ66K41 422 aaPredicted RBP13.49□□□□□ -0.25
SKA2-205ENST00000580541 PRSS41Q7RTY9 318 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 MAVSQ7Z434 540 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 LIX1Q8N485 282 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 NATD1Q8N6N6 113 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 AMER3Q8N944 861 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 PMEPA1Q969W9 287 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 TM4SF18Q96CE8 201 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 MTERF3Q96E29 417 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 PEX11GQ96HA9 241 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 ZBTB18Q99592 522 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 SORBS1Q9BX66 1292 aaKnown RBP13.49□□□□□ -0.25
SKA2-205ENST00000580541 CHST8Q9H2A9 424 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 RPF2Q9H7B2 306 aaKnown RBP13.49□□□□□ -0.25
SKA2-205ENST00000580541 KCNK13Q9HB14 408 aa13.49□□□□□ -0.25
SKA2-205ENST00000580541 MYNNQ9NPC7 610 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms