RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 A0A1B0GUH1 482 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 EXOC1LA0A1B0GW35 172 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 DNAJB6O75190 326 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 COX7A2P14406 83 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 PIK3CBP42338 1070 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 CYB561P49447 251 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 LIM2P55344 173 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 SRSF1Q07955 248 aaKnown RBP eCLIP18.85■□□□□ 0.61
SMG8-204ENST00000580498 PCDH1Q08174 1060 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 GTF2H2Q13888 395 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 RUNX2Q13950 521 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 GTF2H2CQ6P1K8 395 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 GFRALQ6UXV0 394 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 OR7G3Q8NG95 312 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 RGMAQ96B86 450 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 QRFPRQ96P65 431 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 SLX1AQ9BQ83 275 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 NECTIN3Q9NQS3 549 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 LRFN1Q9P244 771 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 PHF11Q9UIL8 331 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 OSGIN2Q9Y236 505 aa18.85■□□□□ 0.61
SMG8-204ENST00000580498 SETXQ7Z333 2677 aaKnown RBP18.84■□□□□ 0.61
SMG8-204ENST00000580498 SVILO95425 2214 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 CTNSO60931 367 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 SEMA7AO75326 666 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 TGFB1P01137 390 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 ALDOAP04075 364 aaKnown RBP18.84■□□□□ 0.61
SMG8-204ENST00000580498 TNNI3P19429 210 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 CPN2P22792 545 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 PPP2R1BP30154 601 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 ARFIP1P53367 373 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 BIKQ13323 160 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 E2F2Q14209 437 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 PCBP2Q15366 365 aaKnown RBP eCLIP18.84■□□□□ 0.61
SMG8-204ENST00000580498 ELAVL1Q15717 326 aaKnown RBP18.84■□□□□ 0.61
SMG8-204ENST00000580498 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.84■□□□□ 0.61
SMG8-204ENST00000580498 C4orf17Q53FE4 359 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 KHDRBS2Q5VWX1 349 aaKnown RBP18.84■□□□□ 0.61
SMG8-204ENST00000580498 TRMT10CQ7L0Y3 403 aaKnown RBP18.84■□□□□ 0.61
SMG8-204ENST00000580498 SCUBE1Q8IWY4 988 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 TMEM156Q8N614 296 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 PSMG3-AS1Q96PY0 264 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 IPPKQ9H8X2 491 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 FBXW2Q9UKT8 454 aa18.84■□□□□ 0.61
SMG8-204ENST00000580498 HECTD1Q9ULT8 2610 aa18.83■□□□□ 0.61
SMG8-204ENST00000580498 TRBV11-1A0A0K0K1C0 115 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 C4orf51C9J302 202 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 SNRPAP09012 282 aaKnown RBP18.83■□□□□ 0.6
SMG8-204ENST00000580498 MTHFD2P13995 350 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 EPORP19235 508 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 CD22P20273 847 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 HIST1H1TP22492 207 aaPredicted RBP18.83■□□□□ 0.6
SMG8-204ENST00000580498 PTX3P26022 381 aaPredicted RBP18.83■□□□□ 0.6
SMG8-204ENST00000580498 GMPRP36959 345 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 CD96P40200 585 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 CCNG1P51959 295 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 C10orf62Q5T681 223 aaPredicted RBP18.83■□□□□ 0.6
SMG8-204ENST00000580498 VN1R5Q7Z5H4 357 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 ACOT4Q8N9L9 421 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 OR14A16Q8NHC5 309 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 MTBPQ96DY7 904 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 AICDAQ9GZX7 198 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 WDR41Q9HAD4 459 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 PRDM7Q9NQW5 492 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 KLHL1Q9NR64 748 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 ANKRD10Q9NXR5 420 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 SEC14L3Q9UDX4 400 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 TSC22D4Q9Y3Q8 395 aa18.83■□□□□ 0.6
SMG8-204ENST00000580498 STX16-NPEPL1H3BU86 382 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 STX16O14662 325 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 KLK8O60259 260 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 PRAMEF4O60810 478 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 ZFAND5O76080 213 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 CLDN9O95484 217 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 ABHD2P08910 425 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 ATP5A1P25705 553 aaKnown RBP18.82■□□□□ 0.6
SMG8-204ENST00000580498 BUD31P41223 144 aaPredicted RBP18.82■□□□□ 0.6
SMG8-204ENST00000580498 MAPKAPK3Q16644 382 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 TECRLQ5HYJ1 363 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 DEPDC1Q5TB30 811 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 PRAMEF9Q5VWM5 478 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 TTC19Q6DKK2 380 aaPredicted RBP18.82■□□□□ 0.6
SMG8-204ENST00000580498 OR4C11Q6IEV9 310 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 SLC25A25Q6KCM7 469 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 GOLGA7Q7Z5G4 137 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 CLNKQ7Z7G1 428 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 SHISA5Q8N114 240 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 PTGR2Q8N8N7 351 aaPredicted RBP18.82■□□□□ 0.6
SMG8-204ENST00000580498 HUS1BQ8NHY5 278 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 ISL2Q96A47 359 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 MRPL57Q9BQC6 102 aaKnown RBP18.82■□□□□ 0.6
SMG8-204ENST00000580498 SUCOQ9UBS9 1254 aaKnown RBP18.82■□□□□ 0.6
SMG8-204ENST00000580498 COPS7AQ9UBW8 275 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 NFU1Q9UMS0 254 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 ASB1Q9Y576 335 aa18.82■□□□□ 0.6
SMG8-204ENST00000580498 IQANK1A0A1B0GTG1 560 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 HMX2A2RU54 273 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 TRIM49D1C9J1S8 452 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 H0YIV9 168 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 E2F3O00716 465 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms