RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 EXO5Q9H790 373 aa12.78□□□□□ -0.36
CSNK1D-211ENST00000579316 ZNF703Q9H7S9 590 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-211ENST00000579316 TUBA8Q9NY65 449 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-211ENST00000579316 SAMD15Q9P1V8 674 aa12.78□□□□□ -0.36
CSNK1D-211ENST00000579316 ZFATQ9P243 1243 aa12.78□□□□□ -0.36
CSNK1D-211ENST00000579316 PAK5Q9P286 719 aa12.78□□□□□ -0.36
CSNK1D-211ENST00000579316 KIAA1549Q9HCM3 1950 aa12.78□□□□□ -0.36
CSNK1D-211ENST00000579316 SH3D21A4FU49 640 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 KDM4EB2RXH2 506 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 IL18BPO95998 194 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 IL2RAP01589 272 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 FPR1P21462 350 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 FDFT1P37268 417 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 PAFAH1B1P43034 410 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 DNASE1L1P49184 302 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 ADARP55265 1226 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 WNT3P56703 355 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 ETF1P62495 437 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 DMTNQ08495 405 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 HYAL2Q12891 473 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 PWP1Q13610 501 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 ZNF750Q32MQ0 723 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 KIAA0930Q6ICG6 404 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 FAM47EQ6ZV65 393 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 C17orf53Q8N3J3 647 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 ASB11Q8WXH4 323 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 LPGAT1Q92604 370 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 MAGOHBQ96A72 148 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 CCL19Q99731 98 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 PCBD2Q9H0N5 130 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 ACKR4Q9NPB9 350 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 SEMA4BQ9NPR2 832 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 CCDC177Q9NQR7 707 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 RNF14Q9UBS8 474 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 ADGRE2Q9UHX3 823 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 SH2B3Q9UQQ2 575 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 EIF3LQ9Y262 564 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 ATG4BQ9Y4P1 393 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 MMACHCQ9Y4U1 282 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 ROS1P08922 2347 aa12.77□□□□□ -0.37
CSNK1D-211ENST00000579316 DSCAMO60469 2012 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.76□□□□□ -0.378e-12■■□□□ 14.3
CSNK1D-211ENST00000579316 E7EVH7 732 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 GFYI3L273 518 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 ESR1P03372 595 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 RNH1P13489 461 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 PAX1P15863 534 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 OPRM1P35372 400 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 TBPL1P62380 186 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 ACKR1Q16570 336 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 BBS9Q3SYG4 887 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 NSUN5P2Q63ZY6 315 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 C20orf204Q6ZNR8 217 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 HIPK1Q86Z02 1210 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 SCUBE1Q8IWY4 988 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 LRRC25Q8N386 305 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 PRELID2Q8N945 189 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 NEIL3Q8TAT5 605 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 GRK7Q8WTQ7 553 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 HSPBAP1Q96EW2 488 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 WDR83Q9BRX9 315 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 TREX1Q9NSU2 369 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 QPCTLQ9NXS2 382 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 GALPQ9UBC7 116 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 CLDN16Q9Y5I7 305 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 DOCK7Q96N67 2140 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 USF3Q68DE3 2245 aa12.76□□□□□ -0.37
CSNK1D-211ENST00000579316 EEF1E1-BLOC1S5C9J1V9 151 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 NDUFS4O43181 175 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 PHF1O43189 567 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 EEF1E1O43324 174 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 B3GALT4O96024 378 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 CCL3P10147 92 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 CHRM3P20309 590 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 CTSSP25774 331 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 FMO4P31512 558 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 GRK3P35626 688 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 GRIA1P42261 906 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 PTH2RP49190 550 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 FNTAP49354 379 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 CAPRIN1Q14444 709 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 CYP1B1Q16678 543 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 HECTD2Q5U5R9 776 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 CCDC137Q6PK04 289 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 SYT10Q6XYQ8 523 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 ABHD13Q7L211 337 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 STRA8Q7Z7C7 330 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 PPHLN1Q8NEY8 458 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 FAM136AQ96C01 138 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 SLC6A15Q9H2J7 730 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 LIN28AQ9H9Z2 209 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 SH2D2AQ9NP31 389 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 RAB6BQ9NRW1 208 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 TESMINQ9Y4I5 508 aa12.75□□□□□ -0.37
CSNK1D-211ENST00000579316 NCKAP5O14513 1909 aa12.74□□□□□ -0.37
CSNK1D-211ENST00000579316 MBD3L3A6NE82 208 aaPredicted RBP12.74□□□□□ -0.37
CSNK1D-211ENST00000579316 CD8B2A6NJW9 211 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms