RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 LPAR3Q9UBY5 353 aa10.08□□□□□ -0.8
GGA3-206ENST00000578773 NENFQ9UMX5 172 aa10.08□□□□□ -0.8
GGA3-206ENST00000578773 ZNF281Q9Y2X9 895 aa10.08□□□□□ -0.8
GGA3-206ENST00000578773 SLC22A7Q9Y694 548 aa10.08□□□□□ -0.8
GGA3-206ENST00000578773 SMNDC1O75940 238 aaKnown RBP eCLIP10.07□□□□□ -0.8
GGA3-206ENST00000578773 DPP4P27487 766 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 UGT2B10P36537 528 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 GBX1Q14549 363 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 P3H1Q32P28 736 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 ZNF791Q3KP31 576 aaPredicted RBP10.07□□□□□ -0.8
GGA3-206ENST00000578773 ANKRD20A4Q4UJ75 823 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 ACSBG2Q5FVE4 666 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 FAM120AOSQ5T036 256 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 THEMIS2Q5TEJ8 643 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 CAPN13Q6MZZ7 669 aaPredicted RBP10.07□□□□□ -0.8
GGA3-206ENST00000578773 SYDE1Q6ZW31 735 aaPredicted RBP10.07□□□□□ -0.8
GGA3-206ENST00000578773 CLNKQ7Z7G1 428 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 VSIG1Q86XK7 387 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 SCUBE1Q8IWY4 988 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 DEPDC4Q8N2C3 294 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 ZNF611Q8N823 705 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 SGMS2Q8NHU3 365 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 AKAP1Q92667 903 aaKnown RBP eCLIP10.07□□□□□ -0.8
GGA3-206ENST00000578773 P3H4Q92791 437 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 NTNG2Q96CW9 530 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 FAM111AQ96PZ2 611 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 SPNS1Q9H2V7 528 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 C12orf65Q9H3J6 166 aaKnown RBP10.07□□□□□ -0.8
GGA3-206ENST00000578773 CALHM2Q9HA72 323 aa10.07□□□□□ -0.8
GGA3-206ENST00000578773 EIF2B3Q9NR50 452 aaKnown RBP10.07□□□□□ -0.8
GGA3-206ENST00000578773 MAGED1Q9Y5V3 778 aaPredicted RBP10.07□□□□□ -0.8
GGA3-206ENST00000578773 A0A1W2PNV4 684 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 FAM234BA2RU67 622 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 H7C0C1 242 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 GFYI3L273 518 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 UBFD1O14562 309 aaKnown RBP10.06□□□□□ -0.8
GGA3-206ENST00000578773 NDUFS4O43181 175 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 CEP104O60308 925 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 LMX1BO60663 402 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 NIPSNAP2O75323 286 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 PSIP1O75475 530 aaKnown RBP10.06□□□□□ -0.8
GGA3-206ENST00000578773 TRAPPC6AO75865 159 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 RCBTB2O95199 551 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 ALOX12P18054 663 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 IMPA1P29218 277 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 CD79BP40259 229 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 HNF4AP41235 474 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 ATP5OP48047 213 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 NAGLUP54802 743 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 EIF3BP55884 814 aaKnown RBP10.06□□□□□ -0.8
GGA3-206ENST00000578773 RAB8AP61006 207 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 ABATP80404 500 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 VLDLRP98155 873 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 ASPHQ12797 758 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 MIDNQ504T8 468 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 CT47A1Q5JQC4 288 aaPredicted RBP10.06□□□□□ -0.8
GGA3-206ENST00000578773 PTRHD1Q6GMV3 140 aaKnown RBP10.06□□□□□ -0.8
GGA3-206ENST00000578773 ITPRIPL1Q6GPH6 555 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 CLEC17AQ6ZS10 378 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 KLHDC8BQ8IXV7 354 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 CA13Q8N1Q1 262 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 OR10G3Q8NGC4 313 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 GSDMBQ8TAX9 411 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 RAB3IL1Q8TBN0 382 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 TNFRSF13CQ96RJ3 184 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 KLHL31Q9H511 634 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 TMEM184CQ9NVA4 438 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 UTP6Q9NYH9 597 aaKnown RBP10.06□□□□□ -0.8
GGA3-206ENST00000578773 PACSIN3Q9UKS6 424 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 CNOT11Q9UKZ1 510 aaKnown RBP10.06□□□□□ -0.8
GGA3-206ENST00000578773 BOKQ9UMX3 212 aaPredicted RBP10.06□□□□□ -0.8
GGA3-206ENST00000578773 LIPT1Q9Y234 373 aa10.06□□□□□ -0.8
GGA3-206ENST00000578773 AAR2Q9Y312 384 aaKnown RBP10.06□□□□□ -0.8
GGA3-206ENST00000578773 hCG_1818297A0A087WSY0 165 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 SYF2O95926 243 aaKnown RBP10.05□□□□□ -0.8
GGA3-206ENST00000578773 SERPIND1P05546 499 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 F7P08709 466 aaPredicted RBP10.05□□□□□ -0.8
GGA3-206ENST00000578773 CDH1P12830 882 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 MARCKSL1P49006 195 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 RNF4P78317 190 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 FAPQ12884 760 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 ARHGAP19Q14CB8 494 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 HERC3Q15034 1050 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 TERF2Q15554 542 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 NFKBIBQ15653 356 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 FNDC7Q5VTL7 733 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 LIPNQ5VXI9 398 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 SLC22A10Q63ZE4 541 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 ALKBH5Q6P6C2 394 aaKnown RBP10.05□□□□□ -0.8
GGA3-206ENST00000578773 AFTPHQ6ULP2 937 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 HSDL2Q6YN16 418 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 MBOAT1Q6ZNC8 495 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 PM20D2Q8IYS1 436 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 MFSD9Q8NBP5 474 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 OR4L1Q8NH43 312 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 UTP15Q8TED0 518 aaKnown RBP10.05□□□□□ -0.8
GGA3-206ENST00000578773 PAQR8Q8TEZ7 354 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 HTRA1Q92743 480 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 STARD4Q96DR4 205 aa10.05□□□□□ -0.8
GGA3-206ENST00000578773 SGCZQ96LD1 299 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms