RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 HBEGFQ99075 208 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 TBCDQ9BTW9 1192 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 NLNQ9BYT8 704 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 REXO4Q9GZR2 422 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 KLHL25Q9H0H3 589 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 OR51B5Q9H339 312 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 DDX31Q9H8H2 851 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 CLK4Q9HAZ1 481 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 SERTAD3Q9UJW9 196 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 ADAM29Q9UKF5 820 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 MKL2Q9ULH7 1088 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 SLC12A4Q9UP95 1085 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 RUVBL1Q9Y265 456 aaKnown RBP7.61□□□□□ -1.19
COPS3-215ENST00000578317 PTGDR2Q9Y5Y4 395 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 ADAMTS9Q9P2N4 1935 aa7.61□□□□□ -1.19
COPS3-215ENST00000578317 A8MU76 341 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 AGRPO00253 132 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SLC30A4O14863 429 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 UBDO15205 165 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SLC22A2O15244 555 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 HCRTR1O43613 425 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SEC22BO75396 215 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SCELO95171 688 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 NAT2P11245 290 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 PRPS2P11908 318 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 FOLR1P15328 257 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SDHBP21912 280 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 HNRNPH1P31943 449 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 GSTM5P46439 218 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 MASP1P48740 699 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ATP4BP51164 291 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 TGM3Q08188 693 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 CYP4F3Q08477 520 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 IL11RAQ14626 422 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 GRM7Q14831 915 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 FAM214AQ32MH5 1076 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 YOD1Q5VVQ6 348 aaPredicted RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 FAM219BQ5XKK7 198 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 OR4C11Q6IEV9 310 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 NOXRED1Q6NXP6 359 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 TLDC1Q6P9B6 456 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 CYB5D1Q6P9G0 228 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 PAGE2Q7Z2X7 111 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 UBE3DQ7Z6J8 389 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 CACNA2D3Q8IZS8 1091 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ASCC3Q8N3C0 2202 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 RNF175Q8N4F7 328 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 FNDC5Q8NAU1 212 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 AGBL5Q8NDL9 886 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.6□□□□□ -1.192e-9■■■□□ 17.2
COPS3-215ENST00000578317 TMEM131Q92545 1883 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ZNF501Q96CX3 271 aaPredicted RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 APIPQ96GX9 242 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 PPP1R36Q96LQ0 422 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 CCDC74BQ96LY2 380 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 QRFPRQ96P65 431 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 F2RL3Q96RI0 385 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ZNF717Q9BY31 904 aaPredicted RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 ROGDIQ9GZN7 287 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 AICDAQ9GZX7 198 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 RABEP2Q9H5N1 569 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 PRDM7Q9NQW5 492 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SDR39U1Q9NRG7 319 aaPredicted RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 FGF21Q9NSA1 209 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SOHLH2Q9NX45 425 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SIDT1Q9NXL6 827 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 NOP53Q9NZM5 478 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 CRIM1Q9NZV1 1036 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 HEY2Q9UBP5 337 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 EIF3LQ9Y262 564 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 GPR45Q9Y5Y3 372 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 A0A088AWK7 358 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 GOLGA8QA0A0J9YX86 632 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 GOLGA8OA6NCC3 632 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 B4E171 279 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 GOLGA8NF8WBI6 632 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 FAM229AH3BQW9 127 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 PLPP1O14494 284 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 RGS13O14921 159 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 DCTN3O75935 186 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 MYO1DO94832 1006 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ALDOCP09972 364 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 IDO1P14902 403 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ALOX12P18054 663 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ZNF10P21506 573 aaPredicted RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 HIST1H1TP22492 207 aaPredicted RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 CSTF2P33240 577 aaKnown RBP eCLIP7.6□□□□□ -1.19
COPS3-215ENST00000578317 BSGP35613 385 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 TSPAN7P41732 249 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SEPHS1P49903 392 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 PDX1P52945 283 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 VSX2P58304 361 aaPredicted RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 TRA2BP62995 288 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 CYP4F2P78329 520 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ACSM2AQ08AH3 577 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 HERC3Q15034 1050 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 NDUFA9Q16795 377 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ISXQ2M1V0 245 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 IL23RQ5VWK5 629 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 FAM91A1Q658Y4 838 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms