RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 LDLRP01130 860 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 SERPINA7P05543 415 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 FHP07954 510 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 PRR35P0CG20 571 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 COX6A1P12074 109 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 KRT4P19013 534 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 ZNF10P21506 573 aaPredicted RBP12.01□□□□□ -0.49
CCDC57-211ENST00000578187 CCT5P48643 541 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 PRKAA2P54646 552 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 BTN3A2P78410 334 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 RHAGQ02094 409 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 EEF1A2Q05639 463 aaKnown RBP12.01□□□□□ -0.49
CCDC57-211ENST00000578187 TGM3Q08188 693 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 INAQ16352 499 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 CPSF6Q16630 551 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCDC57-211ENST00000578187 TMEM35AQ53FP2 167 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 UNC50Q53HI1 259 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 MFSD4BQ5TF39 518 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 KHDRBS2Q5VWX1 349 aaKnown RBP12.01□□□□□ -0.49
CCDC57-211ENST00000578187 ZYG11AQ6WRX3 759 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 RPS27LQ71UM5 84 aaKnown RBP12.01□□□□□ -0.49
CCDC57-211ENST00000578187 CA13Q8N1Q1 262 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 BCORP1Q8N888 145 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 HUS1BQ8NHY5 278 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 WDR20Q8TBZ3 569 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 RDH11Q8TC12 318 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 GRHL3Q8TE85 626 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 FAR1Q8WVX9 515 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 TBC1D20Q96BZ9 403 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 CCDC126Q96EE4 140 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 CMTM7Q96FZ5 175 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 APOPT1Q96IL0 206 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 FAR2Q96K12 515 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 MAGEB10Q96LZ2 347 aaPredicted RBP12.01□□□□□ -0.49
CCDC57-211ENST00000578187 KCNC2Q96PR1 638 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 CDK15Q96Q40 435 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 F2RL3Q96RI0 385 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 SERINC2Q96SA4 455 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 BARD1Q99728 777 aaKnown RBP12.01□□□□□ -0.49
CCDC57-211ENST00000578187 RBCK1Q9BYM8 510 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 PRDM7Q9NQW5 492 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 PTGFRNQ9P2B2 879 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 C19orf25Q9UFG5 118 aaPredicted RBP12.01□□□□□ -0.49
CCDC57-211ENST00000578187 GRID1Q9ULK0 1009 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 PPT2Q9UMR5 302 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 CSAG2Q9Y5P2 127 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 MAST4O15021 2626 aa12.01□□□□□ -0.49
CCDC57-211ENST00000578187 IGHV1-45A0A0A0MS14 117 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 TRAV17A0A0B4J275 112 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 A0A0G2JN53 185 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 A0A1B0GTL3 188 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 C8orf89P0DMQ9 161 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 MYL2P10916 166 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 RNH1P13489 461 aaKnown RBP12□□□□□ -0.49
CCDC57-211ENST00000578187 IMPDH1P20839 514 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 JAK1P23458 1154 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 CERS1P27544 350 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 ARFIP1P53367 373 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 PLA2G16P53816 162 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 MTTPP55157 894 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 CDH13P55290 713 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 PHEXP78562 749 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 CLCQ05315 142 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 ZNF844Q08AG5 666 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 Q0VFX4 171 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 DDX39BQ13838 428 aaKnown RBP12□□□□□ -0.49
CCDC57-211ENST00000578187 ZRSR2Q15696 482 aaKnown RBP12□□□□□ -0.49
CCDC57-211ENST00000578187 MINDY4Q4G0A6 757 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 C10orf62Q5T681 223 aaPredicted RBP12□□□□□ -0.49
CCDC57-211ENST00000578187 DEPDC1Q5TB30 811 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 FAAH2Q6GMR7 532 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 RPUSD3Q6P087 351 aaKnown RBP12□□□□□ -0.49
CCDC57-211ENST00000578187 LETMD1Q6P1Q0 360 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 QSOX2Q6ZRP7 698 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 UBE3DQ7Z6J8 389 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 RNF175Q8N4F7 328 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 SRFBP1Q8NEF9 429 aaKnown RBP12□□□□□ -0.49
CCDC57-211ENST00000578187 OR4F6Q8NGB9 312 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 OR1N1Q8NGS0 311 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 BRIX1Q8TDN6 353 aaKnown RBP12□□□□□ -0.49
CCDC57-211ENST00000578187 ADAMTS18Q8TE60 1221 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 ATP6V1E2Q96A05 226 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 ZNF382Q96SR6 550 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 MTERF1Q99551 399 aaKnown RBP12□□□□□ -0.49
CCDC57-211ENST00000578187 TBCDQ9BTW9 1192 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 TUBB6Q9BUF5 446 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 ROGDIQ9GZN7 287 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC57-211ENST00000578187 OLAHQ9NV23 265 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 PSD3Q9NYI0 1048 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 LRRK2Q5S007 2527 aa12□□□□□ -0.49
CCDC57-211ENST00000578187 NBASA2RRP1 2371 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 WIPF3A6NGB9 483 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 MAGEB17A8MXT2 336 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 FOXE1O00358 373 aaPredicted RBP11.99□□□□□ -0.49
CCDC57-211ENST00000578187 PPP6CO00743 305 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 B3GALT2O43825 422 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 CDC123O75794 336 aaPredicted RBP11.99□□□□□ -0.49
CCDC57-211ENST00000578187 SUPT7LO94864 414 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 TGFB1P01137 390 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms