RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ZNF691Q5VV52 312 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TMEM220Q6QAJ8 160 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ZNF551Q7Z340 670 aaPredicted RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 TRMT11Q7Z4G4 463 aaKnown RBP5.14□□□□□ -1.59
VAPA-203ENST00000577539 SNX29P2Q8IUI4 249 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 CENPSQ8N2Z9 138 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ABHD11Q8NFV4 315 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 OR4A15Q8NGL6 344 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 AP2M1Q96CW1 435 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TCEAL4Q96EI5 215 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 KCNC2Q96PR1 638 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 HEPHQ9BQS7 1158 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 MAGIXQ9H6Y5 334 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TM9SF3Q9HD45 589 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ADPRHL2Q9NX46 363 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 SELENONQ9NZV5 590 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TMPRSS11EQ9UL52 423 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 ITM2BQ9Y287 266 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TMED5Q9Y3A6 229 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 WNT6Q9Y6F9 365 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 KCNE2Q9Y6J6 123 aa5.14□□□□□ -1.59
VAPA-203ENST00000577539 TRBV5-3A0A0A0MS03 114 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 TTC34A8MYJ7 566 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 RGS10O43665 173 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 RFPL2O75678 378 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 KCNK5O95279 499 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 TGFB1P01137 390 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 HTR1AP08908 422 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ELFN1P0C7U0 828 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 POU2F1P14859 743 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 JUNBP17275 347 aaPredicted RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 HOXD12P35452 270 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 OR1E2P47887 323 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CSNK1DP48730 415 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 DGKEP52429 567 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 NUDT6P53370 316 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 PFN3P60673 137 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 RPS13P62277 151 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 AQP6Q13520 282 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ARHGEF6Q15052 776 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 PLEKHS1Q5SXH7 462 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.13□□□□□ -1.59
VAPA-203ENST00000577539 SHQ1Q6PI26 577 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 DHRS4L2Q6PKH6 230 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 Q6ZPB1 254 aaPredicted RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 SZRD1Q7Z422 152 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 C11orf74Q86VG3 221 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CFAP206Q8IYR0 622 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 OR5AK3PQ8NH89 298 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 TANKQ92844 425 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 TESCQ96BS2 214 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 OR51B5Q9H339 312 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 IL1RAPQ9NPH3 570 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 FAIMQ9NVQ4 179 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 PAK1IP1Q9NWT1 392 aaPredicted RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 MAN2B2Q9Y2E5 1009 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CHD5Q8TDI0 1954 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 HTTP42858 3142 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 TMEM82A0PJX8 343 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CLDN25C9JDP6 229 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 FRS3O43559 492 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CBFA2T3O75081 653 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 VIPP01282 170 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CCDC159P0C7I6 412 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 IFNGR1P15260 489 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CD22P20273 847 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 POU1F1P28069 291 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 PDHA2P29803 388 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 RRM2P31350 389 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 VIPR1P32241 457 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CHI3L1P36222 383 aaPredicted RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 HPCAL1P37235 193 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 SLC6A12P48065 614 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 MLLT10P55197 1068 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 NCS1P62166 190 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CYP4F2P78329 520 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 FPGSQ05932 587 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 LRRC32Q14392 662 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 TEAD2Q15562 447 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 DPY19L1Q2PZI1 675 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 TMEM236Q5W0B7 351 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ERICH5Q6P6B1 374 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CNKSR3Q6P9H4 555 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 Q6ZNX1 250 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 B3GNT8Q7Z7M8 397 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CDH24Q86UP0 819 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 P2RY8Q86VZ1 359 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CALHM3Q86XJ0 350 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CACUL1Q86Y37 369 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ZZZ3Q8IYH5 903 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CPXM2Q8N436 756 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 L3MBTL4Q8NA19 623 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ATL1Q8WXF7 558 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ING5Q8WYH8 240 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 LYSMD1Q96S90 227 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 DOK1Q99704 481 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 HERC2P3Q9BVR0 1158 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 MKRN2Q9H000 416 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 PRDM8Q9NQV8 689 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 GPR27Q9NS67 375 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms