RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 OR51B5Q9H339 312 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 CLMPQ9H6B4 373 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 DMRT3Q9NQL9 472 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 NECTIN3Q9NQS3 549 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 PRTFDC1Q9NRG1 225 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 TBK1Q9UHD2 729 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 TEKT2Q9UIF3 430 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 PCDHGA10Q9Y5H3 936 aa13.1□□□□□ -0.31
GGA3-203ENST00000577435 RELNP78509 3460 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 DYTNA2CJ06 578 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 ESPNB1AK53 854 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 PYCARD-AS1I3L0S3 204 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 DLX3O60479 287 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 SLU7O95391 586 aaKnown RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 MAOAP21397 527 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 HSD17B3P37058 310 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 RPS13P62277 151 aaKnown RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 VSNL1P62760 191 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 TERF2Q15554 542 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 B3GNTL1Q67FW5 361 aaPredicted RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 RPUSD3Q6P087 351 aaKnown RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 WDR93Q6P2C0 686 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 MILR1Q7Z6M3 343 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 ZCCHC7Q8N3Z6 543 aaKnown RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 GALNT11Q8NCW6 608 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 TMEM52Q8NDY8 209 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 NFAM1Q8NET5 270 aaPredicted RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 ZNF354BQ96LW1 612 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 NSUN5Q96P11 429 aaKnown RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 MTERF1Q99551 399 aaKnown RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 BARD1Q99728 777 aaKnown RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 MAPKAP1Q9BPZ7 522 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 ILKAPQ9H0C8 392 aaPredicted RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 STMN3Q9NZ72 180 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 PPIEQ9UNP9 301 aaKnown RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 PLAAQ9Y263 795 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 CSAG2Q9Y5P2 127 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 HIVEP3Q5T1R4 2406 aa13.09□□□□□ -0.31
GGA3-203ENST00000577435 FLNBO75369 2602 aaKnown RBP13.09□□□□□ -0.31
GGA3-203ENST00000577435 A0A1W2PPM1 405 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 SAGE2PA6NJ88 616 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 GOLGA8RI6L899 631 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 RTCAO00442 366 aaKnown RBP13.08□□□□□ -0.32
GGA3-203ENST00000577435 CDH16O75309 829 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 OTCP00480 354 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 IMPDH1P20839 514 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 ATP5F1P24539 256 aaPredicted RBP13.08□□□□□ -0.32
GGA3-203ENST00000577435 TNFSF10P50591 281 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 HNRNPFP52597 415 aaKnown RBP13.08□□□□□ -0.32
GGA3-203ENST00000577435 PRKAA2P54646 552 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 HERVK_113P63132 956 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 ARG2P78540 354 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 DDX39BQ13838 428 aaKnown RBP13.08□□□□□ -0.32
GGA3-203ENST00000577435 ZNF169Q14929 603 aaPredicted RBP13.08□□□□□ -0.32
GGA3-203ENST00000577435 ABHD17BQ5VST6 288 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 FRG2Q64ET8 278 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 ATCAYQ86WG3 371 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 SLC22A9Q8IVM8 553 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 CYP4X1Q8N118 509 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 LGI4Q8N135 537 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 RNF175Q8N4F7 328 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 SNRNP40Q96DI7 357 aaKnown RBP13.08□□□□□ -0.32
GGA3-203ENST00000577435 CDK15Q96Q40 435 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 FRG2BQ96QU4 278 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 ERVK-6Q9BXR3 956 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 ZNF717Q9BY31 904 aaPredicted RBP13.08□□□□□ -0.32
GGA3-203ENST00000577435 DDX31Q9H8H2 851 aaKnown RBP13.08□□□□□ -0.32
GGA3-203ENST00000577435 KCNK13Q9HB14 408 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.32
GGA3-203ENST00000577435 MS4A12Q9NXJ0 267 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 LUZP4Q9P127 313 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 SPACA6W5XKT8 324 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 LRRK2Q5S007 2527 aa13.08□□□□□ -0.32
GGA3-203ENST00000577435 TRAV17A0A0B4J275 112 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 A8MUI8 341 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 TGFBR3LH3BV60 316 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 SAP18O00422 153 aaKnown RBP13.07□□□□□ -0.32
GGA3-203ENST00000577435 PPP6CO00743 305 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 PLPP1O14494 284 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 GLRA3O75311 464 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 SH3BGRLO75368 114 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 SEMA3DO95025 777 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 WDPCPO95876 746 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 NUDT17P0C025 328 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 CRHR1P34998 444 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 BSGP35613 385 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 SSR2P43308 183 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 CCT5P48643 541 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 GPR143P51810 404 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 NEK2P51955 445 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 RAP1GDS1P52306 607 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 CDH13P55290 713 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 CLCQ05315 142 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 SLC13A2Q13183 592 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 SLAMF1Q13291 335 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 BIKQ13323 160 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 MEP1AQ16819 746 aa13.07□□□□□ -0.32
GGA3-203ENST00000577435 UNC50Q53HI1 259 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms