RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TMEM205Q6UW68 189 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 FAM180AQ6UWF9 173 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 NEK10Q6ZWH5 1172 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 VN1R4Q7Z5H5 301 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 BCORP1Q8N888 145 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ZCCHC10Q8TBK6 192 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 CD200R1Q8TD46 325 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 MAIP1Q8WWC4 291 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 RERGQ96A58 199 aaPredicted RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 VPS50Q96JG6 964 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 SIGLEC10Q96LC7 697 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 IMMP1LQ96LU5 166 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 SERPINB12Q96P63 405 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 NDNQ99608 321 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 SLX1AQ9BQ83 275 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 VN1R1Q9GZP7 353 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 DRC3Q9H069 523 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ZNF700Q9H0M5 742 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ATG10Q9H0Y0 220 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 MKKSQ9NPJ1 570 aaPredicted RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 IARS2Q9NSE4 1012 aaKnown RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 OLAHQ9NV23 265 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 INTS10Q9NVR2 710 aaKnown RBP5.87□□□□□ -1.47
NUP88-212ENST00000576708 SLC17A6Q9P2U8 582 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 FBXO5Q9UKT4 447 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 DHRS7Q9Y394 339 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 NEU2Q9Y3R4 380 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 MAD1L1Q9Y6D9 718 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 ATP23Q9Y6H3 246 aa5.87□□□□□ -1.47
NUP88-212ENST00000576708 UNC79Q9P2D8 2635 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 HIVEP3Q5T1R4 2406 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 TRAV17A0A0B4J275 112 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 A0A1W2PQ72 361 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 DYTNA2CJ06 578 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 ZNF860A6NHJ4 632 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 GOLGA6L6A8MZA4 724 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 NPIPB6E9PJ23 425 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 PCDH17O14917 1159 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 PRPF4O43172 522 aaKnown RBP eCLIP5.86□□□□□ -1.47
NUP88-212ENST00000576708 ZBTB14O43829 449 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 RDH16O75452 317 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 UNC5CO95185 931 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 CCNDBP1O95273 360 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 STSP08842 583 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 C8orf89P0DMQ9 161 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 MLNP12872 115 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 EZRP15311 586 aaKnown RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 PI3P19957 117 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 GABRB3P28472 473 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 HSD17B2P37059 387 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 SKIV2L2P42285 1042 aaKnown RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 MAGEA3P43357 314 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 AVPR1BP47901 424 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 CDKN2DP55273 166 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 TBPL1P62380 186 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 CSNK1G2P78368 415 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 ABATP80404 500 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 SARNPP82979 210 aaKnown RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 MEF2AQ02078 507 aaPredicted RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 ZNF33BQ06732 778 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 NAA25Q14CX7 972 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 LONRF1Q17RB8 773 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 ZXDCQ2QGD7 858 aaPredicted RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 TTLL9Q3SXZ7 439 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 MINDY4Q4G0A6 757 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 RBM20Q5T481 1227 aaKnown RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 GARNL3Q5VVW2 1013 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 SP5Q6BEB4 398 aaPredicted RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 CCDC137Q6PK04 289 aaKnown RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 TEPPQ6URK8 271 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 GFRALQ6UXV0 394 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 PDSS2Q86YH6 399 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 EGFL6Q8IUX8 553 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 LRRC8AQ8IWT6 810 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 RASGEF1CQ8N431 466 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 NAT8LQ8N9F0 302 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 MCUQ8NE86 351 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 TRIM58Q8NG06 486 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 OR5T3Q8NGG3 340 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 OR51Q1Q8NH59 317 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 COG1Q8WTW3 980 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 EEF1AKMT1Q8WVE0 214 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 NR4A3Q92570 626 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 HAS2Q92819 552 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 MOCOSQ96EN8 888 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 MVB12AQ96EY5 273 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 CYTH2Q99418 400 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 HES7Q9BYE0 225 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 UNKQ9C0B0 810 aaKnown RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 CCDC68Q9H2F9 335 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 HOMER3Q9NSC5 361 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 C14orf105Q9NVL8 296 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 ANKRD10Q9NXR5 420 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 STMN3Q9NZ72 180 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 SH3BGRL2Q9UJC5 107 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 PDE10AQ9Y233 779 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 PPP2R2CQ9Y2T4 447 aa5.86□□□□□ -1.47
NUP88-212ENST00000576708 SPTBN1Q01082 2364 aaKnown RBP5.86□□□□□ -1.47
NUP88-212ENST00000576708 TRGV8A0A0C4DH27 118 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms