RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 MS4A12Q9NXJ0 267 aa13.2□□□□□ -0.3
RPAIN-217ENST00000575711 PHF11Q9UIL8 331 aa13.2□□□□□ -0.3
RPAIN-217ENST00000575711 ZMIZ1Q9ULJ6 1067 aa13.2□□□□□ -0.3
RPAIN-217ENST00000575711 ZNF891A8MT65 544 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-217ENST00000575711 SLCO1B7G3V0H7 640 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 EFSO43281 561 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 TMPRSS11DO60235 418 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 CDC123O75794 336 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-217ENST00000575711 MYO1DO94832 1006 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 IGHEP01854 428 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 GBAP04062 536 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 HEXBP07686 556 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 FAM58BPP0C7Q3 252 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 CPN2P22792 545 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 PRPH2P23942 346 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 ITPKBP27987 946 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 TMPRSS3P57727 454 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 FOXL2P58012 376 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 ERV3-1Q14264 604 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 SSPNQ14714 243 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 PDCD2Q16342 344 aaPredicted RBP13.19□□□□□ -0.3
RPAIN-217ENST00000575711 TUBB8Q3ZCM7 444 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 FAM69BQ5VUD6 431 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 GPR180Q86V85 440 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 FAM47BQ8NA70 645 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 METTL2AQ96IZ6 378 aaKnown RBP13.19□□□□□ -0.3
RPAIN-217ENST00000575711 C7orf26Q96N11 449 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 MAPKAP1Q9BPZ7 522 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 LRTM1Q9HBL6 345 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 RIC8BQ9NVN3 520 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 C1orf109Q9NX04 203 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 C3orf18Q9UK00 162 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 FBXW2Q9UKT8 454 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 MKL2Q9ULH7 1088 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 MRPS33Q9Y291 106 aaKnown RBP13.19□□□□□ -0.3
RPAIN-217ENST00000575711 CCL27Q9Y4X3 112 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 AHCTF1Q8WYP5 2266 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 CEP295Q9C0D2 2601 aa13.19□□□□□ -0.3
RPAIN-217ENST00000575711 IDSB3KWA1 339 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 NPIPB8E9PQR5 432 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 PCDH7O60245 1069 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 B4GALT2O60909 372 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 GUCY1B2O75343 617 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 SEC22BO75396 215 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 JRKO75564 520 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 RECKO95980 971 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 UMODP07911 640 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 CYC1P08574 325 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 KITP10721 976 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 WT1P19544 449 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 TPP2P29144 1249 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 TLX1P31314 330 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 TIA1P31483 386 aaKnown RBP eCLIP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 BUD31P41223 144 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 HK2P52789 917 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 MAPK12P53778 367 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 EMP2P54851 167 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 HNRNPH2P55795 449 aaKnown RBP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 CRTC2Q53ET0 693 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 XKR7Q5GH72 579 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 MRM1Q6IN84 353 aaKnown RBP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 RGS9BPQ6ZS82 235 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 Q6ZSR9 355 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 MED25Q71SY5 747 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 LAPTM4BQ86VI4 370 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 RAB43Q86YS6 212 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 SHISA5Q8N114 240 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 OR2T11Q8NH01 316 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 PIWIL2Q8TC59 973 aaKnown RBP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 PPP3R2Q96LZ3 170 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 SLCO1B3Q9NPD5 702 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 SEMA3GQ9NS98 782 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 SIRT5Q9NXA8 310 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 KCMF1Q9P0J7 381 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 VTI1BQ9UEU0 232 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 MARCOQ9UEW3 520 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-217ENST00000575711 MCM8Q9UJA3 840 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 FRYQ5TBA9 3013 aa13.18□□□□□ -0.3
RPAIN-217ENST00000575711 FER1L5A0AVI2 2057 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 ATP6AP2A0A1C7CYW4 349 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 GNG14A0A1W2PPG7 69 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 BLACEA4D250 179 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 CDC14CA4D256 554 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 FAM227AF5H4B4 570 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 CYR61O00622 381 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 CLDN4O14493 209 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 LSM1O15116 133 aaKnown RBP13.17□□□□□ -0.3
RPAIN-217ENST00000575711 HDAC3O15379 428 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 ATP6AP2O75787 350 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 PRKAR1AP10644 381 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 OTX2P32243 289 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 TRA2BP62995 288 aaKnown RBP13.17□□□□□ -0.3
RPAIN-217ENST00000575711 RPL38P63173 70 aaKnown RBP13.17□□□□□ -0.3
RPAIN-217ENST00000575711 TNFRSF17Q02223 184 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 IL10RAQ13651 578 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 UGT8Q16880 541 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 GALNTL6Q49A17 601 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 ATP6AP1LQ52LC2 224 aa13.17□□□□□ -0.3
RPAIN-217ENST00000575711 GALNT18Q6P9A2 607 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms