RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 FHP07954 510 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 TLX1P31314 330 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 MAPK12P53778 367 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 EMP2P54851 167 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 LIM2P55344 173 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 KLC1Q07866 573 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 TBL3Q12788 808 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 SRSF6Q13247 344 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 GALNTL6Q49A17 601 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 GPR180Q86V85 440 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 RAB43Q86YS6 212 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 ZC3H7AQ8IWR0 971 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 OR2Y1Q8NGV0 311 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 PIWIL2Q8TC59 973 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 CHTF18Q8WVB6 975 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 STARD8Q92502 1023 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 TUBGCP3Q96CW5 907 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 C19orf60Q96EN9 201 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 PPP3R2Q96LZ3 170 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 C7orf26Q96N11 449 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 OR1F2PQ96R84 312 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 MAPKAP1Q9BPZ7 522 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 TGIF2Q9GZN2 237 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 WDR41Q9HAD4 459 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 C1orf109Q9NX04 203 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 MS4A12Q9NXJ0 267 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 VTI1BQ9UEU0 232 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 C3orf18Q9UK00 162 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 MKL2Q9ULH7 1088 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 PCDHGA6Q9Y5G7 932 aa13.7□□□□□ -0.22
NPLOC4-218ENST00000574964 A0A0A6YYD5 115 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 ATP6AP2A0A1C7CYW4 349 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 VSTM2BA6NLU5 285 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 TRPC5OSA6NMA1 111 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 ZNF891A8MT65 544 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 TCP11X1B4DZS4 312 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 TAF4O00268 1085 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 CLDN4O14493 209 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 TERTO14746 1132 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 CNOT3O75175 753 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 JRKO75564 520 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 ATP6AP2O75787 350 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 CDC123O75794 336 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 IGHEP01854 428 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 FAM58BPP0C7Q3 252 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 TPP2P29144 1249 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 TIA1P31483 386 aaKnown RBP eCLIP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 OTX2P32243 289 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 BUD31P41223 144 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 HK2P52789 917 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 UCNP55089 124 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 FOXL2P58012 376 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 GUCY1A3Q02108 690 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 TUBB8Q3ZCM7 444 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 ATP6AP1LQ52LC2 224 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 Q6ZSR9 355 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 WDR75Q8IWA0 830 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 FAM47BQ8NA70 645 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 OR2T11Q8NH01 316 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 CDC26Q8NHZ8 85 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 METTL21AQ8WXB1 218 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 METTL2AQ96IZ6 378 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 SLC45A3Q96JT2 553 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 SPSB2Q99619 263 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 EBPLQ9BY08 206 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 ZNF717Q9BY31 904 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 NUF2Q9BZD4 464 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 SLCO1B3Q9NPD5 702 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 MCM8Q9UJA3 840 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 POLR3HQ9Y535 204 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 ACACBO00763 2458 aa13.69□□□□□ -0.22
NPLOC4-218ENST00000574964 CDC14CA4D256 554 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 IDSB3KWA1 339 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 FAM227AF5H4B4 570 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 HDAC3O15379 428 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 TMPRSS11DO60235 418 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 PEX11AO75192 247 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 KLF7O75840 302 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 ANXA4P09525 319 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 PRPH2P23942 346 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 ITPKBP27987 946 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 MDH1P40925 334 aaKnown RBP13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 HNRNPH2P55795 449 aaKnown RBP13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 RPL38P63173 70 aaKnown RBP13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 TLE3Q04726 772 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 SSPNQ14714 243 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 FAM69BQ5VUD6 431 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 FAAH2Q6GMR7 532 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 RGS9BPQ6ZS82 235 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 LAPTM4BQ86VI4 370 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 VPS50Q96JG6 964 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 PTCHD1Q96NR3 888 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 CNTNAP3BQ96NU0 1288 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 CNTNAP3Q9BZ76 1288 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 PRTFDC1Q9NRG1 225 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 SEMA3GQ9NS98 782 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 KCMF1Q9P0J7 381 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 ZMIZ1Q9ULJ6 1067 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms