RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 SCN1BQ07699 218 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 GPR50Q13585 617 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 ZNF506Q5JVG8 444 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 PM20D1Q6GTS8 502 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 BAIAP2L2Q6UXY1 529 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 LRRC49Q8IUZ0 686 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 TBC1D10CQ8IV04 446 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 SEPT8Q92599 483 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 CORO2AQ92828 525 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 ANKRD27Q96NW4 1050 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 RCHY1Q96PM5 261 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 CCM2Q9BSQ5 444 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 NMUR1Q9HB89 426 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 SH3GLB1Q9Y371 365 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 TMED7Q9Y3B3 224 aa3.64□□□□□ -1.83
CDC27-216ENST00000574304 SERINC4A6NH21 518 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 KLLNB2CW77 178 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 E9PAM4 449 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 IFIT3O14879 490 aaKnown RBP3.63□□□□□ -1.83
CDC27-216ENST00000574304 CTDSPLO15194 276 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 ST8SIA3O43173 380 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 B4GAT1O43505 415 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 CLN5O75503 358 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 SEMA4FO95754 770 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 HSPA4LO95757 839 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 FAM200BP0CF97 657 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 ACKR3P25106 362 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 IER3P46695 156 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 RPS27AP62979 156 aaKnown RBP3.63□□□□□ -1.83
CDC27-216ENST00000574304 PSMD6Q15008 389 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 RNF212Q495C1 297 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 ZNF776Q68DI1 518 aaPredicted RBP3.63□□□□□ -1.83
CDC27-216ENST00000574304 NEPROQ6NW34 567 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 SHQ1Q6PI26 577 aaKnown RBP3.63□□□□□ -1.83
CDC27-216ENST00000574304 DCLRE1AQ6PJP8 1040 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 NLRP14Q86W24 1093 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 KLHL7Q8IXQ5 586 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 RNF149Q8NC42 400 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 KIAA0895Q8NCT3 520 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 PCNPQ8WW12 178 aaKnown RBP3.63□□□□□ -1.83
CDC27-216ENST00000574304 ITLN1Q8WWA0 313 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 CKAP2Q8WWK9 683 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 FAM162AQ96A26 154 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 ZNF274Q96GC6 653 aaPredicted RBP3.63□□□□□ -1.83
CDC27-216ENST00000574304 RUNDC3BQ96NL0 473 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 VIPAS39Q9H9C1 493 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 GPR173Q9NS66 373 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 CLEC5AQ9NY25 188 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 SLCO1C1Q9NYB5 712 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 MGAT4AQ9UM21 535 aa3.63□□□□□ -1.83
CDC27-216ENST00000574304 BCLAF3A2AJT9 711 aaKnown RBP3.62□□□□□ -1.83
CDC27-216ENST00000574304 SLC30A4O14863 429 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 HCKP08631 526 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 SCG2P13521 617 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 CCND3P30281 292 aaPredicted RBP3.62□□□□□ -1.83
CDC27-216ENST00000574304 SLC1A6P48664 564 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 FKBP1BP68106 108 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 CYLC2Q14093 348 aaPredicted RBP3.62□□□□□ -1.83
CDC27-216ENST00000574304 FASTKQ14296 549 aaKnown RBP3.62□□□□□ -1.83
CDC27-216ENST00000574304 MPP7Q5T2T1 576 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 HIPK1Q86Z02 1210 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 SIX6OS1Q8N1H7 587 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 CARNMT1Q8N4J0 409 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 UXS1Q8NBZ7 420 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 C8orf46Q8TAG6 207 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 KIAA1524Q8TCG1 905 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 RFT1Q96AA3 541 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 C17orf62Q9BQA9 187 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 SLC39A8Q9C0K1 460 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 PNNQ9H307 717 aaKnown RBP3.62□□□□□ -1.83
CDC27-216ENST00000574304 S100A14Q9HCY8 104 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 SH3GLB2Q9NR46 395 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 MED17Q9NVC6 651 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 GPR132Q9UNW8 380 aa3.62□□□□□ -1.83
CDC27-216ENST00000574304 VENTXO95231 258 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 CALCAP01258 141 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 CASTP20810 708 aaKnown RBP3.61□□□□□ -1.83
CDC27-216ENST00000574304 SPRP35270 261 aaPredicted RBP3.61□□□□□ -1.83
CDC27-216ENST00000574304 MATKP42679 507 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 NHLRC3Q5JS37 347 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 TMEM64Q6YI46 380 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 FAM47EQ6ZV65 393 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 NUFIP2Q7Z417 695 aaKnown RBP3.61□□□□□ -1.83
CDC27-216ENST00000574304 GLRX5Q86SX6 157 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 VSIG1Q86XK7 387 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 ZBED8Q8IZ13 594 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 NME8Q8N427 588 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 NHLRC2Q8NBF2 726 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 KLHL30-AS1Q8NEE0 82 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 GPR148Q8TDV2 347 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 DEPDC1BQ8WUY9 529 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 IDI2Q9BXS1 227 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 LIME1Q9H400 295 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 MRPL17Q9NRX2 175 aaKnown RBP3.61□□□□□ -1.83
CDC27-216ENST00000574304 VSIG4Q9Y279 399 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 MRPL11Q9Y3B7 192 aaKnown RBP3.61□□□□□ -1.83
CDC27-216ENST00000574304 CPQQ9Y646 472 aa3.61□□□□□ -1.83
CDC27-216ENST00000574304 TEX48A0A1B0GUV7 120 aa3.6□□□□□ -1.83
CDC27-216ENST00000574304 SRRM4A7MD48 611 aaKnown RBP3.6□□□□□ -1.83
CDC27-216ENST00000574304 TMCO5BA8MYB1 307 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms